Gene EcolC_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0009 
Symbol 
ID6064694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp9303 
End bp10181 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content54% 
IMG OID641599414 
Product2-dehydro-3-deoxygalactonokinase 
Protein accessionYP_001723024 
Protein GI170018070 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTC GCTACATCGC AATTGACTGG GGATCGACCA ATCTGCGCGC CTGGCTTTAT 
CAGGGCGACC ACTGCCTGGA GAGCAGGCAA TCAGAAGCAG GCGTCACGCG CCTGAACGGA
AAATCTCCGG CTGCGGTGTT AGCAGAAGTC ACGACCGACT GGCGTGAAGA GAAAACGCCA
GTGGTAATGG CAGGAATGGT TGGCAGCAAC GTCGGCTGGA AAGTTGCACC GTATTTATCT
GTTCCTGCCT GTTTTTCGTC TATTGGCGAA CAATTAACGT CAGTTGGCGA CAATATCTGG
ATTATTCCCG GATTATGTGT CTCTCATGAC GATAACCACA ATGTGATGCG CGGCGAAGAA
ACACAATTGA TCGGCGCGCG AGCTCTGGCT CCTTCCTCTC TTTATGTCAT GCCCGGAACC
CATTGCAAAT GGGTGCAGGC CGATAGCCAG CAAATCAACG ATTTTCGCAC CGTGATGACC
GGTGAATTAC ATCATTTACT GTTAAATCAC TCATTGATTG GCGCAGGTTT GCCGCCGCAG
GAAAACTCTG CCGATGCCTT CACAGCTGGC CTTGAGCGTG GTCTTAATAC GCCCGCCATA
TTGCCGCAGC TTTTTGAAGT TCGCGCCTCG CATGTGCTGG GAACACTTCC CCGCGAACAG
GTCAGCGAAT TTCTCTCTGG TTTGTTGATT GGCGCAGAGG TCGCCAGTAT GCGCGACTAT
GTGGCCCATC AACACGCCAT CACCCTTGTC GCCGGAACAT CGCTGACCGC GCGCTACCAG
CAAGCCTTTC AGGCGATGGG TTGCGACGTG ACGGCGGTGG CGGGCGACAC GGCATTTCAG
GCTGGTATAA GGAGCATCGC TCATGCAGTG GCAAACTAA
 
Protein sequence
MTARYIAIDW GSTNLRAWLY QGDHCLESRQ SEAGVTRLNG KSPAAVLAEV TTDWREEKTP 
VVMAGMVGSN VGWKVAPYLS VPACFSSIGE QLTSVGDNIW IIPGLCVSHD DNHNVMRGEE
TQLIGARALA PSSLYVMPGT HCKWVQADSQ QINDFRTVMT GELHHLLLNH SLIGAGLPPQ
ENSADAFTAG LERGLNTPAI LPQLFEVRAS HVLGTLPREQ VSEFLSGLLI GAEVASMRDY
VAHQHAITLV AGTSLTARYQ QAFQAMGCDV TAVAGDTAFQ AGIRSIAHAV AN