Gene YPK_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4240 
Symbol 
ID6091176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4678969 
End bp4679637 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content48% 
IMG OID641599339 
Product6-phosphogluconate phosphatase 
Protein accessionYP_001722949 
Protein GI170026444 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATCAGA TTCAATGCGT CATGTTCGAT TGCGATGGCA CCTTGGTCGA CAGCGAAGTC 
CTGTGTTGCC AGGCTTACGT CCTAATGTTT GCTCACTACA ATATTCACCT GTCGTTAGAA
GAGGTGATTA AACGCTTTAA AGGCGTAAAA CTGTATGAAA TTGTTGGGAT AGTCTGTAAA
GAATATGGAT TAGACCAACC GATAAAGGTA CTGGAAAAGC TTTACCGTGA AGAAGTAGCA
CGTTTATTCG ATGCCGAATT ACAGCCTATA GCCGGTGTGA AAGCGCTGTT AGAGCAAATC
GTGTTACCCG TCTGCGTGGT ATCCAACGGG CCAGTCAGCA AAATGCAGCA CTCGCTTGGC
CTAACCGGAT TACTGCCATT CTTTGAGGAC CGGCTTTATA GCAGCTATGA TATTCAGCGT
TGGAAGCCTG ATCCGGCTCT GATTTACCAT GCCGCTGAAC ATATGCAGGT TGCCGCTGAG
CACTGTATTT TGATTGAAGA TTCTGCCGCA GGTGCCCAGG CCGGGATTGC CGCCGGTATT
CCGGTGTTTT ATTACTGTGC CGATCCGCAC AACCAACCGA TTAACCACCC GCTAGTGACT
ACTTTCACGG ATATTCAGCA ACTGCCTGAT TTGTGGAAGG AAAGAGGCTG GCATATCACC
CGCGATTAA
 
Protein sequence
MNQIQCVMFD CDGTLVDSEV LCCQAYVLMF AHYNIHLSLE EVIKRFKGVK LYEIVGIVCK 
EYGLDQPIKV LEKLYREEVA RLFDAELQPI AGVKALLEQI VLPVCVVSNG PVSKMQHSLG
LTGLLPFFED RLYSSYDIQR WKPDPALIYH AAEHMQVAAE HCILIEDSAA GAQAGIAAGI
PVFYYCADPH NQPINHPLVT TFTDIQQLPD LWKERGWHIT RD