Gene YPK_4188 details

Gene Information

• Locus tag: YPK_4188
• ID: 6088815
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 4619216
• End bp: 4621039
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641599287
• Product: GTP-binding protein TypA
• Protein accession: YP_001722900
• Protein GI: 170026395
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.428207
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGAGA ATCTGCGTAA CATCGCCATT ATTGCGCACG TTGACCATGG GAAAACTACC 
CTGGTTGATA AGTTGCTACA ACAATCTGGT ACTTTCGGTG AACGTACTGA AGCAACTGAA 
CGTGTAATGG ACTCCAACGA TTTGGAGAAA GAGCGTGGGA TAACCATCCT CGCAAAAAAT 
ACTGCCATTA ATTGGAAAGA CTACCGCATC AACATCGTTG ATACCCCAGG GCACGCCGAT 
TTCGGCGGTG AGGTTGAGCG TGTAATGTCT ATGGTTGACT CTGTGCTGTT GGTCGTCGAC 
GCAATGGATG GCCCAATGCC GCAGACCCGT TTCGTGACCA AAAAAGCCTT TGCTCATGGT 
CTGAAACCTA TCGTGGTTAT CAACAAAGTT GACCGTCCTG GCGCGCGCCC TGACTGGGTT 
GTGGATCAGG TGTTTGACCT GTTCGTTAAC CTGGATGCGA CCGACGAACA ACTGGACTTC 
CCTATCATCT ATGCATCTGC ATTGATGGGT ATCGCGGGTG AAGACCACAA TGATATGGCA 
GAGGATATGA CCCCGCTGTA TCAGGCGATT ATTGACCATG TTCCTGCTCC TGATGTAGAC 
AGTTCTGGTC CGTTGCAGAT GCAAATCTCC CAACTGGATT ACAACAACTA CGTGGGTGTC 
ATCGGTATCG GCCGGATCAA ACGTGGTATT GTTAAGCCTA ATCAGCAAGT TACTGTTATC 
GATAGCGAAG GTAAGACCCG CAACGGTAAA GTGGGCAAAG TACTGGGCCA TATGGGTCTG 
GAACGAATCG AAACTACTCA GGCAGAAGCT GGCGACATCG TTGCTATCAC CGGCCTGGGC 
GAGTTGAACA TCTCTGACAC TATCTGTGAT GTGAATGCGG TTGAAGCATT GCCACCACTG 
TCTGTTGATG AACCAACGGT AACCATGTAT TTCTGCGTTA ACACCTCTCC GTTCTGTGGT 
AAAGAAGGTA AGTATGTGAC TTCACGTCAG ATTCTTGACC GTCTGAACAA AGAGTTGATC 
CATAACGTAG CTCTACGTGT TGAAGAAACG GAAGATGCTG ATGCATTCCG TGTATCAGGC 
CGTGGTGAAC TTCACCTGTC AGTTCTGATC GAAAACATGC GTCGTGAAGG TTTCGAGCTG 
GCTGTTTCTC GTCCTAAAGT TATCAACCGT ATTATCGACG GTCGCAATCA AGAACCTTTT 
GAAAGCGTAA CGCTGGATAT CGAAGAGCAG CACCAGGGCG CAGTAATGCA AGCCATGGGT 
GAGCGTAAAG GTGACGTGAA GGACATGATC CCAGACGGCA AAGGTCGTAT TCGTCTGGAT 
TATATGATCC CAAGCCGTGG CCTGATTGGC TTCCGTACTG AATTCATGAC CATGACTTCT 
GGTACTGGCC TGCTGTACTC CACATTCAGT CATTATGATG ATGTGCGTCC AGGTGATATC 
GGCCAACGCC AAAACGGCGT GCTGATCTCT AATGGCCAGG GTAAAGCGGT TGCGTTCGCA 
TTGTACAAAC TGCAAGATCG CGGCAAGCTG TTCATCGGTC ACGGTACAGA AGTGTATGAA 
GGCCAGATCA TCGGTATTCA CTCACGTTCT AATGACCTGA CGGTAAACTG CCTGACAGGT 
AAGCAGCTGA CTAACATGCG TGCATCCGGT ACTGACGAAG CAACCACTTT GGTTCCTTTC 
CTCAAGAAAA CGTTGGAACA GGCACTGGAA TTCATCGATG ACGATGAATT GGTAGAAGTT 
ACCCCGCAAT CAATCCGTAT TCGTAAGCGT CACCTGACGG AAAACGATCG TAAGCGTGCT 
GGACGTGGTC CAAGAGAAGG TTAA 

 

Protein sequence

MIENLRNIAI IAHVDHGKTT LVDKLLQQSG TFGERTEATE RVMDSNDLEK ERGITILAKN 
TAINWKDYRI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AMDGPMPQTR FVTKKAFAHG 
LKPIVVINKV DRPGARPDWV VDQVFDLFVN LDATDEQLDF PIIYASALMG IAGEDHNDMA 
EDMTPLYQAI IDHVPAPDVD SSGPLQMQIS QLDYNNYVGV IGIGRIKRGI VKPNQQVTVI 
DSEGKTRNGK VGKVLGHMGL ERIETTQAEA GDIVAITGLG ELNISDTICD VNAVEALPPL 
SVDEPTVTMY FCVNTSPFCG KEGKYVTSRQ ILDRLNKELI HNVALRVEET EDADAFRVSG 
RGELHLSVLI ENMRREGFEL AVSRPKVINR IIDGRNQEPF ESVTLDIEEQ HQGAVMQAMG 
ERKGDVKDMI PDGKGRIRLD YMIPSRGLIG FRTEFMTMTS GTGLLYSTFS HYDDVRPGDI 
GQRQNGVLIS NGQGKAVAFA LYKLQDRGKL FIGHGTEVYE GQIIGIHSRS NDLTVNCLTG 
KQLTNMRASG TDEATTLVPF LKKTLEQALE FIDDDELVEV TPQSIRIRKR HLTENDRKRA 
GRGPREG