Gene YPK_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4161 
Symbol 
ID6088970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4591447 
End bp4592310 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content49% 
IMG OID641599260 
Producthypothetical protein 
Protein accessionYP_001722873 
Protein GI170026368 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.226862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCA GCATGACCGC CTACGCTCGA CGTGATATTA AGGGTGAATG GGGCAACGCA 
GCCTGGGAGC TGCGTTCCGT TAACCAACGC TATTTAGAAA CGTACATTCG CTTACCAGAA
CAATTCCGGA GTCTGGAACC GGTGATCCGC GAACGTATTC GCAGCCGTCT GACACGGGGA
AAGATTGAAT GTCATTTACG TTTTGAGTTG GATGCCAACG CACAAAGCTC TTTGATCCTC
AATGAAAAAC TGGCGAAGCA GTTAGTTGAA GCCGGTAATT GGGTCAAGAT GCAAAGTGAT
GAAGGCGAAA TTAACCCAGT AGATATCCTG CGCTGGCCAG GGGTAATGTC TGCTGAGGAA
CAAGATTTGG ATGCGATTAG CACCGAGTTA ATGCAGGCGC TAGATACCGC CCTAGACGAT
TTTATTGTTT CCCGAGAAAC TGAAGGGGCA GCACTGAAAA CGCTTATCGA GCAGCGTTTA
GAGGGGGTCA GCGCTGAAGT GGTTAAAGTC CGCGCACATA TGCCAAATAT CTTGCAGTGG
CAACGTGAGC GCTTACTGAA CAAACTGGAA GAAGCGCAAG TTCAGTTGGA AAATACTCGT
TTGGAGCAGG AGTTAGTGCT AATGGCACAG CGTATCGATG TGGCCGAAGA GCTAGATCGT
TTGGAAGCGC ACGTCAAAGA AACATACAAC ATTCTGAAGA AGAAAGAAGC CGTTGGCCGC
CGCCTTGATT TTATGATGCA AGAATTCAAC CGCGAGTCGA ATACGCTGGC ATCAAAATCC
ATCAATGCCG AGGTCACTAA CTCCGCCATC GAGTTAAAGG TGTTGATTGA GCAGATGCGC
GAACAGATCC AAAACGTGGA GTAA
 
Protein sequence
MIRSMTAYAR RDIKGEWGNA AWELRSVNQR YLETYIRLPE QFRSLEPVIR ERIRSRLTRG 
KIECHLRFEL DANAQSSLIL NEKLAKQLVE AGNWVKMQSD EGEINPVDIL RWPGVMSAEE
QDLDAISTEL MQALDTALDD FIVSRETEGA ALKTLIEQRL EGVSAEVVKV RAHMPNILQW
QRERLLNKLE EAQVQLENTR LEQELVLMAQ RIDVAEELDR LEAHVKETYN ILKKKEAVGR
RLDFMMQEFN RESNTLASKS INAEVTNSAI ELKVLIEQMR EQIQNVE