Gene YPK_4158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4158 
SymbolslmA 
ID6090258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp4589059 
End bp4589655 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content48% 
IMG OID641599257 
Productnucleoid occlusion protein 
Protein accessionYP_001722870 
Protein GI170026365 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000407134 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA AAGAAAATAC GAAAAGGAAC AGGCGCGAGG AAATATTGCA GGCTTTAGCG 
CAGATGCTGG AATCCAGCGA CGGCAGCCAA CGCATTACTA CCGCGAAACT CGCCGCTAAT 
GTGGGGGTTT CTGAAGCAGC GCTTTATCGG CATTTCCCCA GTAAAACGCG GATGTTTGAT 
AGCCTGATCG AGTTTATTGA AGATAGTCTG ATGTCCCGCA TTAATTTGAT TCTACAAGAT 
GAAAAAGAGA CGTTTAATCG CCTCCGCTTA ATCCTGCTGT TGGTATTAGG GTTTGCAGAG 
CGCAACCCTG GGCTGACCCG AATCATGACC GGGCATGCGC TCATGTTTGA GCAGGATCGC 
TTACAAGGGC GGATTAACCA GCTATTTGAA CGAATTGAAA TGCAGTTACG CCAAGTCCTT 
CGTGAGAAAA AGCTGCGTGA TGGACAAGGC TTTATCCATG ATGAAGCGTT ACTGGCCACC 
CAGTTGTTGG CATTTTGCGA AGGGATGCTT TCACGCTTCG TTCGTTCTGA ATTCCGTTAC 
TGCCCAACAC AAGAGTTTGA TTCCCGCTGG CCATTGATTG TCGCCCAGTT GCAATAA
 
Protein sequence
MAEKENTKRN RREEILQALA QMLESSDGSQ RITTAKLAAN VGVSEAALYR HFPSKTRMFD 
SLIEFIEDSL MSRINLILQD EKETFNRLRL ILLLVLGFAE RNPGLTRIMT GHALMFEQDR 
LQGRINQLFE RIEMQLRQVL REKKLRDGQG FIHDEALLAT QLLAFCEGML SRFVRSEFRY 
CPTQEFDSRW PLIVAQLQ