Gene YPK_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4143 
Symbol 
ID6088215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4575258 
End bp4576268 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content49% 
IMG OID641599242 
Productprotein of unknown function DUF610 YibQ 
Protein accessionYP_001722855 
Protein GI170026350 
COG category[S] Function unknown 
COG ID[COG2861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCTACT TCAACACACG CCAATTTATC ATCGTAAGCA CGCTATTCAT CGCCAGCACA 
GCACAGGCCG GCAAACTCTC TATTGTTATT GACGATTTTG GTTATCGCCC CCAAAACGAA
AATAAGATTT TACAGATGCC CCTGCCCATT TCAGTGGCCA TTCTGCCTAA TGCTCCTTAC
GCCAGAGAGA TGGCAACCAA AGCCCATAAT CAGGGGCGTG AAATCCTGAT TCACTTGCCG
ATGGCCCCAC AGAGTAAACA GCCACTGGAG CGTGATACCT TGCAGCCTTC AATGAGCAGC
GAGGAAATCC AGCGCATCAT CCGCCAGGCC GCGAATAACG TCCCTTATGC GAAAGGCATG
AATAACCATA TGGGCAGTGC GATGACCGCC AGTTTGCCAG GTATGCAGAA AGTGATGCAG
GCACTGGGGA GTTACCAGCT CTATTTTCTC GACAGTGTGA CTATTGGTAA TAGCCAGGCG
AGCAAAGCCG CCGAAGGCAC TGGTGTCAAA GTGATCAAGC GGAAAATCTT TTTAGATGAC
TCACAAAATG AAGCAGCTAT CCGTCAACAA TTTAACCGGG CAGTAGCACT GGCACGCCGC
AATGGCTCAG CGATTGCTAT CGGGCACCCT CACCCTGCGA CCATTAAAGT ATTGCAACAA
ATGTTGCCTC AGTTGCCTGC CGACATCGTC TTAGTCAGAC CCAGTGCGCT GCTAAATGAA
CCGGTACAAA GTCTCTCTCC GGACAAAACA AAACCACGTG AACCGGTGAA AGGCCAACGT
CTGCCCGCTA TCAAGCAATG TAAAGCGAAA GCCAGCTATG TGCCTGAGAA AATCTACGCT
GATAAGCTGT TTATCTTATT GGGTGAGAGC TTGATGCAAA ACCCGGCGGT CATATTTATT
CAGCAACATT GGCAACAATA TTTTACGCCA GCGCCGCCGG CAACACCTAT TGATGAACAG
AAAGCGATTG AAAATACCGA GAAATTGCCA CCCAAGAAGG CGGCACAATA A
 
Protein sequence
MRYFNTRQFI IVSTLFIAST AQAGKLSIVI DDFGYRPQNE NKILQMPLPI SVAILPNAPY 
AREMATKAHN QGREILIHLP MAPQSKQPLE RDTLQPSMSS EEIQRIIRQA ANNVPYAKGM
NNHMGSAMTA SLPGMQKVMQ ALGSYQLYFL DSVTIGNSQA SKAAEGTGVK VIKRKIFLDD
SQNEAAIRQQ FNRAVALARR NGSAIAIGHP HPATIKVLQQ MLPQLPADIV LVRPSALLNE
PVQSLSPDKT KPREPVKGQR LPAIKQCKAK ASYVPEKIYA DKLFILLGES LMQNPAVIFI
QQHWQQYFTP APPATPIDEQ KAIENTEKLP PKKAAQ