| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4104 |
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| Symbol | hslU |
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| ID | 6087808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4535831 |
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| End bp | 4537162 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641599203 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001722816 |
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| Protein GI | 170026311 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA TGACCCCACG CGAAATAGTT AGCGAACTTG ATAGCCATAT CATCGGCCAA
GACAAAGCCA AGCGTGCGGT GGCTATCGCC CTGCGTAACC GCTGGCGTCG TATGCAGCTT
AACGAAGAGC TGCGCCACGA AGTGACACCT AAAAATATTC TGATGATCGG GCCAACCGGT
GTGGGTAAAA CTGAAATTGC CCGCCGTCTG GCTAAATTGG CCAATGCCCC GTTCATCAAA
GTTGAAGCCA CAAAATTCAC CGAAGTGGGT TATGTTGGTA AAGAAGTGGA TTCTATCATT
CGCGATCTAA CCGATGCAGC CGTAAAAATG GTTCGCCATC AGTCTATCGA GAAAATGCGC
TATCGGGCGG AAGAGTTGGC CGAAGAACGC ATTTTGGATG TGCTCATCCC ACCCGCCAAA
AACAACTGGG GCGTACCGGA TGAATCACAG GAGCCTTCTG CCACCCGTCA GACTTTCCGT
AAGAAGCTGC GCGAAGGCCA ACTGGATGAT AAAGAGATTG AGATAGATCT GGCTGCGGCC
CCGATGGGGG TTGAAATTAT GGCCCCCCCT GGCATGGAAG AGATGACCAA TCAGTTACAA
TCCATGTTCC AGAATATTGC TGGCCAGAAA CAGAAACCGC GCAAAATCAA AATCAAAGAA
GCACTTAAGC TACTGATTGA AGAAGAAGCA GCAAAACTGG TTAATCCAGA AGAGCTGAAA
CAGCAAGCGA TTGATGCGGT TGAACAACAC GGTATCGTGT TTATTGATGA GATCGATAAA
ATCTGTAAAC GCGGCCAGAC TTCCGGCCCA GATGTCTCCC GTGAAGGGGT ACAGCGTGAC
TTACTGCCAC TGGTTGAAGG TTGTACCGTC TCAACCAAGC ACGGCATGGT GAAGACTGAC
CATATTCTGT TTATTGCATC TGGCGCATTC CAGGTTTCCA GTCCATCAGA CTTGATCCCG
GAGTTGCAAG GCCGTTTGCC AATCCGCGTA GAGTTACAAG CGCTGACAAC AGATGACTTT
GAACGCATCT TGACCGAGCC AAGTGCTTCA TTAACCGAAC AGTATAAAGC GCTGATGGCG
ACCGAAGGCG TTACCATCGA GTTTACTCGC GAGGGTATCC GTAAAATTGC TGAAGCGGCA
TGGCAGGTGA ACGAACGTAC CGAAAATATT GGTGCCCGCC GTTTACACAC AGTGTTAGAG
CGTCTGATGG AAGATATTTC CTATGACGCC AGCGAAAGCA GTGGTCAATC TATCACTATT
GACGCGGAAT ACGTCGGTAA GCACTTAGAT GAGCTGGTTG CGGATGAAGA CTTGAGCCGT
TTTATCCTAT AA
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| Protein sequence | MSEMTPREIV SELDSHIIGQ DKAKRAVAIA LRNRWRRMQL NEELRHEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVDSII RDLTDAAVKM VRHQSIEKMR
YRAEELAEER ILDVLIPPAK NNWGVPDESQ EPSATRQTFR KKLREGQLDD KEIEIDLAAA
PMGVEIMAPP GMEEMTNQLQ SMFQNIAGQK QKPRKIKIKE ALKLLIEEEA AKLVNPEELK
QQAIDAVEQH GIVFIDEIDK ICKRGQTSGP DVSREGVQRD LLPLVEGCTV STKHGMVKTD
HILFIASGAF QVSSPSDLIP ELQGRLPIRV ELQALTTDDF ERILTEPSAS LTEQYKALMA
TEGVTIEFTR EGIRKIAEAA WQVNERTENI GARRLHTVLE RLMEDISYDA SESSGQSITI
DAEYVGKHLD ELVADEDLSR FIL
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