Gene YPK_4101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4101 
Symbol 
ID6088199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4533197 
End bp4534225 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content48% 
IMG OID641599200 
ProductDNA-binding transcriptional regulator CytR 
Protein accessionYP_001722813 
Protein GI170026308 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAATA AGAAAGAATT CACAATGACC ACGATGAAAG ATGTTGCTGA AATGGCAGGT 
GTATCAACAG CAACCGTGTC TCGCGCGTTG ATGAACCCTG AAAAGGTTTC AACCGTGACC
CGACAAAAAG TGGAACAAGC CGTTTTGGCT GTTGGTTATT CTCCTCATGC TTTATCCCGT
AATATTAAGC GTAATGAATC ACGTACGATT CTGGTGATCG TACCCGATAT CAGTGACCCA
TTTTTTGCCG ATGTCATTCA GGGCATTGAA CACGCAGCCG CCCAGCAAGG CTATCTGATA
TTAATTGGTG ATTGCGCACA ACAAACCCAG CAAGAGCGCA CATTTGTTAA TCTGATTATC
ACCAAACAGA TCGATGGCAT GCTGCTATTA GGCTCTAACC TGCCTTTTGA TGCCAGTAAA
GAAGAGCAGC GAAATTTACC CCCGATGGTC ATGGCGAATG AGTTTGCTCC TGAGTTGGAG
CTGCCGACCG TACATATCGA TAACCTGACC GCCGCTTATG AAGCCGTTAA CTATTTGCAT
GAGTTGGGCC ATAAACGCAT CGCCTGTATC GCCGGGCCAG AAAGCCTGCC GCTGAGCCAT
TATCGGTTAC AAGGTTATAT TCAGGCACTG CGTCGTAATG GTATTACTGT CGATAATGAC
TATATTATAC GCGGGGATTT CAGCTACGAA GCGGGGGCCC AAAGCTTTGC GGCTCTTATG
GAGCTGCCCC ACCCCCCCAC TGCAATATTT TCTCACAATG ATGTCATGGC AGTAGGGGCT
ATCTGGCAGG CGAAGCAATT AGGGTTACGT ATCCCGCAGG ATGTCTCGCT GGTTGGCTTT
GATGACTTGA AGCTGTCACA GTTTTGTGAC CCCCCATTAA CTACCGTCGC ACAACCCCGT
TACCAGATTG GCCAGCAAGC CATGTTACTC TTACTGGAGC AACTGCAAGG GCATTCAGTA
CAAAGTGGCT CCCGCTTGTT AGATACCGAA TTAATCATCA GGGAAAGTAC TGCTGCGCCT
AAACACTAG
 
Protein sequence
MENKKEFTMT TMKDVAEMAG VSTATVSRAL MNPEKVSTVT RQKVEQAVLA VGYSPHALSR 
NIKRNESRTI LVIVPDISDP FFADVIQGIE HAAAQQGYLI LIGDCAQQTQ QERTFVNLII
TKQIDGMLLL GSNLPFDASK EEQRNLPPMV MANEFAPELE LPTVHIDNLT AAYEAVNYLH
ELGHKRIACI AGPESLPLSH YRLQGYIQAL RRNGITVDND YIIRGDFSYE AGAQSFAALM
ELPHPPTAIF SHNDVMAVGA IWQAKQLGLR IPQDVSLVGF DDLKLSQFCD PPLTTVAQPR
YQIGQQAMLL LLEQLQGHSV QSGSRLLDTE LIIRESTAAP KH