Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4086 |
Symbol | |
ID | 6088158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4511531 |
End bp | 4513882 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641599185 |
Product | TonB-dependent heme/hemoglobin receptor family protein |
Protein accession | YP_001722798 |
Protein GI | 170026293 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTGG ATAAATTAAA CGTCGAAGGT AAAGGGAATG CCCATGATAG CGATTGGATA TATGACGAAC CCCGCTCGGT CAGTGAAATT ACGCGGGAAC AACTTGATAA CCGGCCCGCT CGCCACGCTG CAGATATTTT AGAACAAACT CCCGGTGTCT ATTCCAGCGT TAGCCAACAA GACCCTGGGC TTTCAATAAA TATTCGCGGC ATACAAGATT ATGGCCGTGT AAATATGAAT ATTGACGGTA TGCGTCAGAA CTTTATGAAA AGCGGTCATG GTCAGCGCAA TGGGTCGATG TATATTGACC CAGAAATTTT AAGCAATGTG GTGATTGAAC GGGGCATTTT CAACGGTATT GGTGGGGCGG GAGCCATTGG CGGTATCGCC ACCTTTAATA CCATCAATGC CAGTGATTTT TTGGCCCCAG AGAAAGAGCT GGGCGGGCAT ATCCGGGCAA TGACCGGGGA TAACGGCACC CGCTTTATTG GCAGCGGTGC GTTGGCGCTG GGCAACCCAA ATGGCGATAT ATTACTTGCT GTTAGTGAAC GTAACCTGAA GGATTATTGG CCGGGGAATA AAGGCGTTTT GGCCGGGTTG CGTCTCTATA GCCCTACCAG AAACGTCGGC GATGACTTAA AGAATACCAA GACATTGTTT ACAGGCTATA AAATGCGTTC GCAGCTCGCT AAAGTCGGTT GGAATTTTGA GGCCGGCCAG CGTTTGGAGT TCAGCTATTT ACAAACACAA ATCGCCAGCC CCAATGCCAG TATGCTGTCA GAAGTTCTGG CATTGTCGCC ATCAGGGAAA GAGATAACAA AGATTGGCTG GAGGAACACA AGTTTTACTA ACGTGGAAAA CCGTAATATT GCGTTAGATT ACCGCCTGAA TCCTGAGCAT ATTAGTTGGC TGGATGCAAC GGCAAAGATC TATTACGTTG ATACCAATGA TGAAACTGAT AATGCTAATT CCCTTTTCAA GGAATATTTC TGGACTCAAA CACGCCTGAA AACCCGTGGC TTACAATTGC AAAACACCAA TACCTTTACC CCATCGGATG CGCATCAAAT ACGGTTGAAA TATGGTTTGG AATGGTTTAG CGATAAATCT GAGGGGTACT CAACACGCAA ACTTATTGAA AGAACGACCC CCCCCGGCAA GCGCGCTATC ACCAGTACCT TTGCTCAACT TAACTACGAA TATGATGATT GGCTGCGGTT GGAAGGAGGG CTGCGTTATG ATCAATTCCG TTTGAAAGGC AATACCTGGC TCCATACCCG CTCTTTCCTG CAGCCCTATA CTTTTGAGAA CCCCTGTGAC CGAAGGATAC ATGAGCAGTC TGAAAAGCCT GGATCGCGGT GTTCATCTAG GAGACCCGCA ACAATGAGGT GGGATGTTGA CCGCCGTGAA CAGCAACTCT CGCCAACGTT GGCGATGGGG GTCAAGCCTG GCCTCGAATG GCTGGAGTTT TTTGGCAGCT ACGGTAAATC CTGGCGGCCA CCGGCAATGA CAGAAGTGTT AGCAACCGGC ACCGCCCATG GTTACAGTTG GGTCTTACCT AATCCTTTCG TGGCCGCCGA ACGTGCCAGA ACGTGGGAGG CGGGGTTTAA TATTCAGCAG TCCAATTTAT TTATCGAAGA CGATCACTTT GCCGCGAAGG TCGCTTATTT TGATACCCGT ATTGCCAACT ATATTAACCT TGAATTAGGT AAGGCCAAAC CCAAGTTTGG GGGGGATTCT TTTACTGATG TAGCTTATGT CAATAATTTA CTCAAAACCC GTTTCCGTGG CTTAGAATAT CAATTAAGTT ATGATGCTGG CACATTTTAT ACCAATATTA ATTACACCAG AATGATTGGT GTAAATAATG TTTGTTCACC ATATGCTTGG TTAGGCGGCT TACAGTCAGT AAAATATAAG TACGTTGGAA AGGTAGAGCA AATTTATGCC GTTGAAAATG AGGTGGCCAA TAATTATGTA ACCTGTATGA ATGCCAATGT GTTATTTGGC TCATCGGCTT ATTTACCGGG TGATCGCGGT AGTTTAACTT TGGGGAGTAG AATATTTGAT AGAAGGCTAG ATTTTGGTAC TGTTATCCGT TATAACAAAG GGTATCAGGA TCGTTCAGCG CAAGATGAAA ATGGTAATCC ACTGACGGCT TATGTTGCCG ATTGGCCGAA GTATATCGTA TATGATCTTT ATGCCAGTTA TAAGGTAACG AATAATTTAA TATTGCGTAG TTCAATAGAA AATATAACTA ACCGTGCATA TTTAGTTAAT TATGGCGATA CACTTTCATT CGCCCCTAGT CGCGGTAGGA CTATTCAGGG TGGATTTGAA TATAAATTCT AA
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Protein sequence | MALDKLNVEG KGNAHDSDWI YDEPRSVSEI TREQLDNRPA RHAADILEQT PGVYSSVSQQ DPGLSINIRG IQDYGRVNMN IDGMRQNFMK SGHGQRNGSM YIDPEILSNV VIERGIFNGI GGAGAIGGIA TFNTINASDF LAPEKELGGH IRAMTGDNGT RFIGSGALAL GNPNGDILLA VSERNLKDYW PGNKGVLAGL RLYSPTRNVG DDLKNTKTLF TGYKMRSQLA KVGWNFEAGQ RLEFSYLQTQ IASPNASMLS EVLALSPSGK EITKIGWRNT SFTNVENRNI ALDYRLNPEH ISWLDATAKI YYVDTNDETD NANSLFKEYF WTQTRLKTRG LQLQNTNTFT PSDAHQIRLK YGLEWFSDKS EGYSTRKLIE RTTPPGKRAI TSTFAQLNYE YDDWLRLEGG LRYDQFRLKG NTWLHTRSFL QPYTFENPCD RRIHEQSEKP GSRCSSRRPA TMRWDVDRRE QQLSPTLAMG VKPGLEWLEF FGSYGKSWRP PAMTEVLATG TAHGYSWVLP NPFVAAERAR TWEAGFNIQQ SNLFIEDDHF AAKVAYFDTR IANYINLELG KAKPKFGGDS FTDVAYVNNL LKTRFRGLEY QLSYDAGTFY TNINYTRMIG VNNVCSPYAW LGGLQSVKYK YVGKVEQIYA VENEVANNYV TCMNANVLFG SSAYLPGDRG SLTLGSRIFD RRLDFGTVIR YNKGYQDRSA QDENGNPLTA YVADWPKYIV YDLYASYKVT NNLILRSSIE NITNRAYLVN YGDTLSFAPS RGRTIQGGFE YKF
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