| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4082 |
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| Symbol | |
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| ID | 6091290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4506446 |
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| End bp | 4507249 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641599181 |
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| Product | TonB family protein |
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| Protein accession | YP_001722794 |
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| Protein GI | 170026289 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGAT TACAGCAGAG CAGTGACAAA CTTATATTTT GGCTAGTCGG GGCCTTATTA
GCGTGTGGTA TCCATATTTA TGCACTTTGG TGGCTGAGTA CCGCATCTAT ACCAGCAATA
CCCACCAGCT ACCCCGCCGC AATAATGATG GAGCTTTCAG CCGAACCGGA ATTTATGCAA
AACTTGCCAC AAAACTCAGT GGTGGGCATA ACGCAGAATA TTATCGAGCC TGCGGTTGAG
CAACGGGTCA ACCAGCCGGA TGACATTGTC GATTTACCTA CGCTGCCTGA ACAACCAGAG
GGGCAACGGG AGATTACGAG AAAAGAGCCA ATAAAGGTCA AACGGCCAGC TGAAAATAGA
GCGACATCGC GTAAACCGGT TAATAAAGAA ACACAAGAAA GTGACAGTAA ACAATCCTCA
CCAGCCGCTG CAGCCAGTGC AATGCTTTCA GGGACGAGCC AACAAGTTGC CGCAGCGGTA
AACAGTGACT CATCCCACCG TCAGCAAGCT CAAGTGAGTT GGAAAAGTCG TTTACAGGGG
CATTTAATGG GGTTTAAGCG TTACCCATCC AGTGCCAGAA AACAGCAACA GCAAGGGACT
GCCATGATTC GATTTGTAGT CGATAAAAAT GGTTATGTGT CATCAGTGCA ACTGAGTCAC
AGTAGTGGTA CATCCGCTTT AGATCGCGAG GCGTTAGCGA TTATCAAGCG CGCTCAGCCA
TTACCGAAAC CGCCTGCTGA GTTGTTATCG CAGGGGCAGA TAACATTATC TCTGCCCGTT
GATTTTAATC TAAAAAGGAA ATAA
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| Protein sequence | MNRLQQSSDK LIFWLVGALL ACGIHIYALW WLSTASIPAI PTSYPAAIMM ELSAEPEFMQ
NLPQNSVVGI TQNIIEPAVE QRVNQPDDIV DLPTLPEQPE GQREITRKEP IKVKRPAENR
ATSRKPVNKE TQESDSKQSS PAAAASAMLS GTSQQVAAAV NSDSSHRQQA QVSWKSRLQG
HLMGFKRYPS SARKQQQQGT AMIRFVVDKN GYVSSVQLSH SSGTSALDRE ALAIIKRAQP
LPKPPAELLS QGQITLSLPV DFNLKRK
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