| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4046 |
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| Symbol | |
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| ID | 6088725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4464696 |
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| End bp | 4465514 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641599143 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_001722761 |
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| Protein GI | 170026256 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATGC GCAAGTGGTT ATCCGTGTCC AATAATATAA TGCTTAGCCG TATCAACCGT
AGGCTCCGTG GGTTGCTGCT ACTCATGACC ACCTGTCGTG TACTGACTCT CCCTGCGCTG
ACGATTGGCG TGCTGATAAT GAGTGCGCTG GCAACGAGTG CAGTGGCAAG TGTGATTGCA
GAGAGAACAC GTATTGTCTT CAGTGAAGGC AGTACAGAAG AGTCACTGCA ACTGGTGAAC
AGCAATAGCT ATCCGGTAGC GGTACAAGTT TGGGTGGATG ACGGCAATTT GATGGCGACG
CCTGATAAGG CTGTTTCACC CATATTGGTG TTACCTCCGG TATTCCGGTT ACAACCTCAG
GCACAGCGTA GCCTGCGGTT GATCTTATCT GGTGGGAGTA AATTACCTGC GGATAGGGAA
TCTGCATTCT GGCTAAATAT TTACGAAATC CCGCCTAAGG CAACCCCCAA ATCCGGTGAT
GAATCTTTTG TTACGCTGGC CCTACGGATG CAATATAAAG TCTTTTACCG CCCTAAAAAC
CTACCCGCGC CAGGAGATAT TTTAGGCAAG GCATTAACCT TTAGCCTCGA GCGTAACGGC
GACAGTGCGC TGATTAAGGT TAACAATCCA ACCCCTTACT ATGCATCCTT CGCTGCTTTG
ACCATCGGTT CAGCCGAAGG CCCTCCGGAA ATGGTGGCCC CGTTCTCTCA ATTAGATTTT
CCACTAAACC GAGCGCCAAT TAGCGACAAC AAAACCGTCA ATTTTGATTT AATTGATGAT
TTAGGCAACC GAAACTCTTT TAGCCATGAG TTGAAATAA
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| Protein sequence | MHMRKWLSVS NNIMLSRINR RLRGLLLLMT TCRVLTLPAL TIGVLIMSAL ATSAVASVIA
ERTRIVFSEG STEESLQLVN SNSYPVAVQV WVDDGNLMAT PDKAVSPILV LPPVFRLQPQ
AQRSLRLILS GGSKLPADRE SAFWLNIYEI PPKATPKSGD ESFVTLALRM QYKVFYRPKN
LPAPGDILGK ALTFSLERNG DSALIKVNNP TPYYASFAAL TIGSAEGPPE MVAPFSQLDF
PLNRAPISDN KTVNFDLIDD LGNRNSFSHE LK
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