Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4046 |
Symbol | |
ID | 6088725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4464696 |
End bp | 4465514 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641599143 |
Product | pili assembly chaperone |
Protein accession | YP_001722761 |
Protein GI | 170026256 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATGC GCAAGTGGTT ATCCGTGTCC AATAATATAA TGCTTAGCCG TATCAACCGT AGGCTCCGTG GGTTGCTGCT ACTCATGACC ACCTGTCGTG TACTGACTCT CCCTGCGCTG ACGATTGGCG TGCTGATAAT GAGTGCGCTG GCAACGAGTG CAGTGGCAAG TGTGATTGCA GAGAGAACAC GTATTGTCTT CAGTGAAGGC AGTACAGAAG AGTCACTGCA ACTGGTGAAC AGCAATAGCT ATCCGGTAGC GGTACAAGTT TGGGTGGATG ACGGCAATTT GATGGCGACG CCTGATAAGG CTGTTTCACC CATATTGGTG TTACCTCCGG TATTCCGGTT ACAACCTCAG GCACAGCGTA GCCTGCGGTT GATCTTATCT GGTGGGAGTA AATTACCTGC GGATAGGGAA TCTGCATTCT GGCTAAATAT TTACGAAATC CCGCCTAAGG CAACCCCCAA ATCCGGTGAT GAATCTTTTG TTACGCTGGC CCTACGGATG CAATATAAAG TCTTTTACCG CCCTAAAAAC CTACCCGCGC CAGGAGATAT TTTAGGCAAG GCATTAACCT TTAGCCTCGA GCGTAACGGC GACAGTGCGC TGATTAAGGT TAACAATCCA ACCCCTTACT ATGCATCCTT CGCTGCTTTG ACCATCGGTT CAGCCGAAGG CCCTCCGGAA ATGGTGGCCC CGTTCTCTCA ATTAGATTTT CCACTAAACC GAGCGCCAAT TAGCGACAAC AAAACCGTCA ATTTTGATTT AATTGATGAT TTAGGCAACC GAAACTCTTT TAGCCATGAG TTGAAATAA
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Protein sequence | MHMRKWLSVS NNIMLSRINR RLRGLLLLMT TCRVLTLPAL TIGVLIMSAL ATSAVASVIA ERTRIVFSEG STEESLQLVN SNSYPVAVQV WVDDGNLMAT PDKAVSPILV LPPVFRLQPQ AQRSLRLILS GGSKLPADRE SAFWLNIYEI PPKATPKSGD ESFVTLALRM QYKVFYRPKN LPAPGDILGK ALTFSLERNG DSALIKVNNP TPYYASFAAL TIGSAEGPPE MVAPFSQLDF PLNRAPISDN KTVNFDLIDD LGNRNSFSHE LK
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