| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4001 |
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| Symbol | |
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| ID | 6090698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4412854 |
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| End bp | 4413744 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641599095 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001722717 |
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| Protein GI | 170026212 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.948028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAC AACAAACTCG TCAGGGCATT TTTTTTGCTC TGGCTGCCTA TTTTATTTGG
GGCCTTGCTC CCGCGTATTT CAAACTCATC CAACAAGTGC CCGCTGATGA GATTCTGACC
CACAGGGTCA TCTGGTCATT CTTCTTTATG TTGATTCTGC TTACCGTCAG CCGCCATTGG
CCACAGGTGC GCGACGCCTG CAAAAACCGT AAGCGCCTAT TGTTACTGGC GGTGACCGCC
GTTTTGATTG CCAGTAACTG GCTGCTGTTT ATCTGGGCGG TCAACCACAA TCACATGCTG
GAAGCCAGTC TGGGATATTT CATTAATCCG TTGGTCAATG TGCTGTTTGG CATGTTATTT
CTCGGCGAAC GCTTTCGTCG TATGCAATGG GTCGCCGTGG CACTCGCCTT TGCCGGCGTG
CTGATTCAAC TGTGGCAATT TGGTTCACTG CCAGTGATTG GGCTGGGTCT GGCCATCACC
TTTGCTTTAT ACGGCTTGTT GCGTAAAAAG CTGGGCGTTG ATGCCCAAAC CGGTATGCTC
ATTGAAACCA TGTGGCTGCT ACCAGTAGCC GCCGTATATC TGTTTTTCAT CGCCGACAGC
CCGACCAGCC ACCTGAGCGC CAATGCCTGG TCGCTGAACC TGCTGCTAGC CGCTGCGGGC
GTCATTACCA CAATCCCACT GCTGTTCTTC ACCGCGGCGG CCACCCGTTT GCGTCTTTCG
ACACTGGGTT TCTTCCAGTA TCTTGGGCCA ACATTGATGT TTATTTTGGC GGTGACGTTC
TACGGTGAAA CCATTGGTAA TGACAAGATG GTGACCTTCA TCTTTATCTG GGCGGCCCTG
CTACTGTTTA CGCTGGATGC ACTCTATACC CAACGCAAAC TACGCCGGTA A
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| Protein sequence | MDKQQTRQGI FFALAAYFIW GLAPAYFKLI QQVPADEILT HRVIWSFFFM LILLTVSRHW
PQVRDACKNR KRLLLLAVTA VLIASNWLLF IWAVNHNHML EASLGYFINP LVNVLFGMLF
LGERFRRMQW VAVALAFAGV LIQLWQFGSL PVIGLGLAIT FALYGLLRKK LGVDAQTGML
IETMWLLPVA AVYLFFIADS PTSHLSANAW SLNLLLAAAG VITTIPLLFF TAAATRLRLS
TLGFFQYLGP TLMFILAVTF YGETIGNDKM VTFIFIWAAL LLFTLDALYT QRKLRR
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