Gene YPK_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3987 
Symbol 
ID6089993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp4396881 
End bp4397549 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID641599081 
Producthypothetical protein 
Protein accessionYP_001722703 
Protein GI170026198 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCGT TTACTGCCCA ACAGCGGATG ACCGCGTTGG TATGGCTATC GCTATTCCAT 
ATTGTCATCA TTACCTCCAG TAACTACCTG GTGCAATTGC CGATCGCTAT CTTCGGCTTT 
CATACCACTT GGGGGGCTTT TACCTTTCCA TTTATCTTCT TAGCCACTGA CCTGACCGTG 
CGAATTTTTG GTGCCCCTTT GGCGCGCCGG ATTATTCTTT CCGTGATGGT GCCCGCGTTG 
TTGATTTCGT ATCTGATATC AGCACTGTTT TATCAGGGAA GCTGGCAGGG GTTCCCCGCA 
TTAACCAGTT TTAATCTGGT GGTTGCTCGT ATCGCCGTCG CCAGTTTTAT GGCCTATGTT 
CTTGGCCAAA TTCTGGATGT TCAGGTGTTT AACCGCCTAC GTCAGCGTAA TGCCTGGTGG 
GTTGCACCTA CTGCGGCCAT GTTCTTTGGC AATATCAGTG ACACCATGGC ATTCTTCTTC 
ATTGCTTTCT ATCGCAGTAG TGACCCGTTT ATGGCAGCAC ACTGGGTAGA AATTGCGTTA 
GTCGATTACA GCTTTAAGCT GTTAATTTGC ATGTTGTTCT TCCTGCCAGC TTATGGCGTG 
ATGCTGAATG TGTTGCTGAA GTACTTTGCC CGGCAGACGG GTCAGCCAGT GCTGGCAACT 
GAACGATAG
 
Protein sequence
MFSFTAQQRM TALVWLSLFH IVIITSSNYL VQLPIAIFGF HTTWGAFTFP FIFLATDLTV 
RIFGAPLARR IILSVMVPAL LISYLISALF YQGSWQGFPA LTSFNLVVAR IAVASFMAYV 
LGQILDVQVF NRLRQRNAWW VAPTAAMFFG NISDTMAFFF IAFYRSSDPF MAAHWVEIAL 
VDYSFKLLIC MLFFLPAYGV MLNVLLKYFA RQTGQPVLAT ER