Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3958 |
Symbol | ugpQ |
ID | 6087460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4367127 |
End bp | 4367876 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641599052 |
Product | cytoplasmic glycerophosphodiester phosphodiesterase |
Protein accession | YP_001722674 |
Protein GI | 170026169 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0262456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAG ACTGGCCTTA CCCTCCTATC GTTGCCCATC GGGGTGGCGG ATCACTGGCA CCGGAAAATA CACTGGCCGC AATTGATGTC GGTGCGCGCT ACGGCCATAA GATGATCGAA TTTGACGCCA AGCTATCGCA GGATGGGCAA ATCTTTTTAC TGCATGATGA CACCCTAGAA CGTACCAGCA ATGGCTGGGG GGTAGCGGGT GAGTTGGCGT GGGAAAAACT GATTCAGCTA GATGCGGGTG ACTGGTTCAG CAAGGCATTT CGTGGTGAAC GCTTACCTTT ACTCTCTGAA GTAGCGGCGC GTTGTGCGCA GCACGGTATG GCCGCCAATA TCGAAATTAA ACCGACAACC GGCACGGATG CTCCGACTGG CCGGGCGATT GCGCTCGCCG CTCGCGCATT GTGGCAAGGG CAGCCGATCC CCCCCCTGCT GTCCTCTTTT TCCGTTGACG CGCTGGCCGC CGCGCAACTC GCTGCCCCTG AGCTACCACG CGGATTGTTG CTGGATAAAT GGGATGACAA TTGGGCGGCA CTGACCACAC AACTTGATTG TGTTTCGCTG CATATTAATC ACAAACAGCT AACAGCAGAA CGCGTGGCGT TACTCAAAGC CGCTGGGTTA CGTATTTTGG TCTACACGGT GAACCAACCC GAGCGGGCGC GGGAATTACT CAATTGGGGC GTTGACTGTA TCTGTACTGA CCGTATAGAT TTACTGGGTT CGGACTTTAC CGGCTGCTGA
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Protein sequence | MNRDWPYPPI VAHRGGGSLA PENTLAAIDV GARYGHKMIE FDAKLSQDGQ IFLLHDDTLE RTSNGWGVAG ELAWEKLIQL DAGDWFSKAF RGERLPLLSE VAARCAQHGM AANIEIKPTT GTDAPTGRAI ALAARALWQG QPIPPLLSSF SVDALAAAQL AAPELPRGLL LDKWDDNWAA LTTQLDCVSL HINHKQLTAE RVALLKAAGL RILVYTVNQP ERARELLNWG VDCICTDRID LLGSDFTGC
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