Gene YPK_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3947 
Symbol 
ID6091139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4353663 
End bp4354193 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content50% 
IMG OID641599041 
Producthypothetical protein 
Protein accessionYP_001722663 
Protein GI170026158 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTTTA ATGATGCCAT TACTACCACC ATTGATTTTG TTCGCGTACA TGAAGCGTGG 
GCTATACCGA TTGTCTTTAT TTTGGCTTTT GGCGAATCAT TGGCTTTTCT CTCCCTATTA
TTGCCAGCAA CAGTCATCTT ACTTGGGTTA GGGGCATTGA TTGGTGAAAG TGGCATTCCT
TTTTGGCCAA TCTGGGCCGC CGCCGCTGCG GGTGCTTTCT TCGGTGACTG GGTCTCGTAT
TGGGTCGGAA TTCATTATAA GGACCGCGTT GCCACCTTGT GGCCACTCTC CCGAAATCCC
CAGTTACTGG TTCGAGGCCA TGCTTTCTTC GAGCGTTGGG GGTTCTTTGG GGCCTTTTTT
GGCCGTTTCT TCGGCCCGTT GCGTGCTATC GTCCCTCTAG TCGCTGGTAT TTGTGCCATG
CCTCAACGCT ATTTCCAACT GGCTAATATT ACCTCAGCTC TGATTTGGGC TTTTGGTATT
TTGGCTCCAG GAGCATTCGG CATTCAATGG CTGTCCAATT GGATAGGCTA A
 
Protein sequence
MTFNDAITTT IDFVRVHEAW AIPIVFILAF GESLAFLSLL LPATVILLGL GALIGESGIP 
FWPIWAAAAA GAFFGDWVSY WVGIHYKDRV ATLWPLSRNP QLLVRGHAFF ERWGFFGAFF
GRFFGPLRAI VPLVAGICAM PQRYFQLANI TSALIWAFGI LAPGAFGIQW LSNWIG