Gene YPK_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3931 
Symbol 
ID6088885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp4336151 
End bp4336762 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content46% 
IMG OID641599025 
Producthypothetical protein 
Protein accessionYP_001722647 
Protein GI170026142 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.457043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCTT ATCTGATACC CGCTATGCCG GTTACTATCA GCGAAGAGAT CAAGAAAAGC 
CGTTTCATTA CCTTATTGGC TCATACCTGT GGGGTTAATG AGGCTAAAGA TTTTATTCAG 
CAGGTTAAGC AACAACATCC AACGGCCCGG CATCATTGCT GGGCTTTTGT TGCCGGTCCC 
CCGACGGATT CTCAGCAGTT AGGTTTTTCC GATGATGGAG AACCCTCTGG CACCGCCGGT 
AAACCCATCT TGGCACAACT GATGGGGAGT GATATTGGAG AAATTACGGC TGTTGTTGTG 
CGTTATTATG GGGGCATTAA ACTTGGCACA GGTGGGTTAG TAAAAGCTTA TGGTAGTGGT 
GTGCAGCAGG CACTAAAACA GGTAGCGGTA AAATATAAAG TCCCACAGGT GGAATATACT 
TTACAGTGTG ACTATGCGCA GCTTGCTATG GTAGAAATGC TATTACAGCA GGTTGAAGGC 
CAGATTTTAC GAGGTGAATA CACGGAACTT GTAACACTTC ATCTCACTCT GCCAGCAACT 
CAAGCCAGCC AAGTCGGGGA TAAATTGCGT GATCTCAGTC GTGGTACATT GCAATTAACA 
CCTATTTCGT AA
 
Protein sequence
MQPYLIPAMP VTISEEIKKS RFITLLAHTC GVNEAKDFIQ QVKQQHPTAR HHCWAFVAGP 
PTDSQQLGFS DDGEPSGTAG KPILAQLMGS DIGEITAVVV RYYGGIKLGT GGLVKAYGSG 
VQQALKQVAV KYKVPQVEYT LQCDYAQLAM VEMLLQQVEG QILRGEYTEL VTLHLTLPAT 
QASQVGDKLR DLSRGTLQLT PIS