Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3925 |
Symbol | |
ID | 6091289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4326860 |
End bp | 4327615 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641599017 |
Product | integrase catalytic region |
Protein accession | YP_001722643 |
Protein GI | 170026138 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00155278 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAGA GCCGCACTGT ATACAACTAT CGTAGCCATC GTGACGATCG GGCTATTACT CAGCGAATAC GGGAAATTGC GGAGACGCGC ATCCGTTATG GCTGTCCGCG CATTCATATC CTGCTGCGGA GAGAAGGCTG GCTTGTTAAC CATAAGAAAA CGCACCGTAT TTACTGTCTT GAGGGTCTCA ATCTACGTTC GAAACGTCCA CGGCGGCATG TGACAGCGAG GCACAGGCAC GCACGTCCAG AAGTGACCGC GTTAGATCAG TGCTGGAGCA TGGATTTCGT TGCTGATAAT CTGTTCAACG GGCGTCGGGT CAGGGCGCTA ACTATAGTGG ATAATTTTAG TCGTGAATGT CTGGCGATCG AGGTCGGTCA GGGGTTACGT GGAGATGATG TTGTGGCTGT CATGGACAGA TTAAAACATT CGCTGGGGCG TATTCCACAA AGGCTGCAGA CAGATAACGG CAGCGAATTC ATCTCGAAGT CGATGGACCG ATGGGCGAAT GAAAACAGGG TCACGATGGA CTTTTCAGGC CCCGGAAAGC CTACAGATAA TGCCTTTATC GAGTCATTTA ATGGCAGTCT GAGGGATGAA TGTCTGAACG TGCACGGGTT CCTTTCTCTG GAAGATGCTC AGGAGAAAAT TGAACAATGG CGGCAAGAAT ATAATCATTT TCGTCCGCAT TCTTCGTTAA ATAACCTGAC TCCGGCAGAA TTTGCTCGAA GTCATCAAAA AGGTCCGGAT CTCTGA
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Protein sequence | MMQSRTVYNY RSHRDDRAIT QRIREIAETR IRYGCPRIHI LLRREGWLVN HKKTHRIYCL EGLNLRSKRP RRHVTARHRH ARPEVTALDQ CWSMDFVADN LFNGRRVRAL TIVDNFSREC LAIEVGQGLR GDDVVAVMDR LKHSLGRIPQ RLQTDNGSEF ISKSMDRWAN ENRVTMDFSG PGKPTDNAFI ESFNGSLRDE CLNVHGFLSL EDAQEKIEQW RQEYNHFRPH SSLNNLTPAE FARSHQKGPD L
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