| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3898 |
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| Symbol | |
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| ID | 6088684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4298851 |
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| End bp | 4300065 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641598990 |
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| Product | putative inner membrane protein |
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| Protein accession | YP_001722616 |
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| Protein GI | 170026111 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2391] Predicted transporter component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTGGC CCGAGTTTAA ATCTCAATAT CTGGTGCGCT TTTGGGCACC TTTACCTGCG
GTTATTGCTG CCGGTATCTT AGCGACCTAT TACTTTGGTT TGACTGGCAC GTTCTGGGCG
GTCACTGGTG AGTTTACTCG CTGGGGGGGC CATATTATGC AATTGTTTGG TGCACAGCCA
CAGGAGTGGG GCTATTTTAA AGTGATCGGT CTGGAAGGAA CGCCACTGGA TCGTATCGAT
GGCATGATGA TTATCGGTAT GTTCGCCGGT TGTATCGCTG CGGCACTCTG GGCTAACAAT
ATTAAGTTAC GTAAGCCGCA ACACACTATC CGCATTGCAC AGGCGCTGGT GGGGGGCATA
ATTGCTGGTT TTGGTGCCCG TCTGGCGATG GGGTGCAATT TAGCCGCCTT CTTTACCGGC
ATTCCGCAAT TTTCACTGCA CGCGTGGTTT TTTGCACTAG CGACGGCAGC GGGCTCTTAC
TTTGGGGCCA AATTTACGCT GCTCCCCCTG TTCCGCATTC CGATTAAACT ACAAAAAGTG
ACTGCCGCCT CACCACTGAC GCAGCACCCA GCCAGAGCGG CACGCCGTTT CCGTCTGGGA
ATGGTGGTCT TGGTTCTGGC GCTTGGCTGG TCCCTGATTG AGTTGTTCCG TCAGCCTAAA
TTGGGGATTG CCATGCTGTG CGGGATTGGC TTTGGGCTCC TGATTGAACG TGCTCAGATT
TGCTTTACCT CCGCTTTTCG TGACTTGTGG ATAACCGGGC GCACCCATAT GGCTAAGGCC
ATTATTCTAG GAATGGCGGT CAGTACTCTC GGCATTTTCA GCTACGTCCA GCTGGGCGTC
GAACCTAAAA TTCTGTGGGC TGGGCCAAAT GCGGTAATAG GTGGTTTACT GTTTGGTTTT
GGTATCGTGC TGGCGGGTGG CTGTGAAACC GGTTGGATGT ACCGTGCGGT GGAAGGGCAA
ATTCATTATT GGTGGGTGGG ATTGGGCAAT ATTATCGGCG CAACTCTCTT GGCCTACTAC
TGGGACGATT TCGCCCCTGC GTTGGCGACC AATTACGATA AAGTTAACCT GTTGGAGACG
TTTGGACCGA TGGGCGGGTT GCTGGTGACT TACCTAATGT TGGCACTAGC ATTTGCCGCC
ATGCTGTGGT GGGAGAAGCG TTTCTTTCGC AAACAAAAAG CGACAACCTC GGCCCTGATT
AAGGAATCCT TATGA
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| Protein sequence | MSWPEFKSQY LVRFWAPLPA VIAAGILATY YFGLTGTFWA VTGEFTRWGG HIMQLFGAQP
QEWGYFKVIG LEGTPLDRID GMMIIGMFAG CIAAALWANN IKLRKPQHTI RIAQALVGGI
IAGFGARLAM GCNLAAFFTG IPQFSLHAWF FALATAAGSY FGAKFTLLPL FRIPIKLQKV
TAASPLTQHP ARAARRFRLG MVVLVLALGW SLIELFRQPK LGIAMLCGIG FGLLIERAQI
CFTSAFRDLW ITGRTHMAKA IILGMAVSTL GIFSYVQLGV EPKILWAGPN AVIGGLLFGF
GIVLAGGCET GWMYRAVEGQ IHYWWVGLGN IIGATLLAYY WDDFAPALAT NYDKVNLLET
FGPMGGLLVT YLMLALAFAA MLWWEKRFFR KQKATTSALI KESL
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