Gene YPK_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3848 
Symbol 
ID6089865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4237533 
End bp4238681 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content51% 
IMG OID641598940 
Productlactaldehyde reductase 
Protein accessionYP_001722566 
Protein GI170026061 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID[TIGR02638] lactaldehyde reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCA TGTTGGCACT ACCGAAAATC AGCTTGCACG GCACGGGTGC AATCGGCGAT 
ATGGTTAAAT TACTCAGTGA CAAACAGTGG GGGAAAGCAC TGATTGTTAC TGACGGGCAA
CTGGTTGAAC TCGGCTTATT GGACAGTTTA TTCGCGGCGC TGGCGCAGTA TCAGTTACCT
TACGGGCTGT TTGGGGAGGT ATTCCCTAAT CCAACAGAAG AGTTGGTCCA GGCCGGTTTT
GCCGCCTTTA CCCAGCATCA ATGTGACTAT TTGATTGCCT TCGGTGGTGG CAGCCCCATT
GATACCGCCA AAGCCATCAA GATACTGACT GCCAATCCGG GGCCATCCAC CGCTTATTCC
GGTGTAGGTA AAGTCAAACA AACGGGTGTT CCGTTGATAG CCATCAATAC CACGGCAGGA
ACGGCGGCGG AATTGACCAG TAATGCGGTG ATTATTGATA GCCAGCGACA AGTGAAGGAG
GTGATTATCG ATACCAATCT CATCCCTGAT ATTGCGGTTG ACGATCCCTC AGTAATGCTC
AATATTCCCG CCAGTGTCAC GGCGGCGACG GGGATGGATG CCCTTACCCA CGCAGTCGAA
GCGTATGTCT CGTTAGGTGC ACATACGTTA ACGGACCATT CAGCGCTCGA ATCAATCCGT
CTTATCAGCC AATGGTTGCC ATTAGCGGTC GCTGACGGCA AAAACCTACA AGCGCGCGAA
ATGATGGCAT GTGGGCAATA TTTGGCGGGT ATGGCGTTTA ACAGTGCTGG GCTAGGTTTG
GTTCACGCAC TGGCCCACCA ACCGGGTGCC ACACATAATC TTCCTCATGG CGTCTGCAAT
GCTATCTTGC TGCCGGTAAT TGAAGAATAT AATCGCCCGC AGGCTACCCG CCGTTTTGCC
CGAATTGCAC AGGCAATGGG GGTAGACACT CAGGACATGA GTGATGAGCA AGCAAGTCAT
CAGGCGATAG CGGCCATTCG TCAGTTATCG CTGCAAGTTG GTATTCCTGC CGGGTTCTCC
GCCTTAGGTA TTGAGGAAAG TGATATTGAA GGTTGGTTAG ATAAAGCGCT GGCTGACCCT
TGTGCTCCTT GTAACCCACG TTCTGCAGAT CGGGAACAAA TTCGCACACT GTACTTACAG
GCACTTTAA
 
Protein sequence
MSFMLALPKI SLHGTGAIGD MVKLLSDKQW GKALIVTDGQ LVELGLLDSL FAALAQYQLP 
YGLFGEVFPN PTEELVQAGF AAFTQHQCDY LIAFGGGSPI DTAKAIKILT ANPGPSTAYS
GVGKVKQTGV PLIAINTTAG TAAELTSNAV IIDSQRQVKE VIIDTNLIPD IAVDDPSVML
NIPASVTAAT GMDALTHAVE AYVSLGAHTL TDHSALESIR LISQWLPLAV ADGKNLQARE
MMACGQYLAG MAFNSAGLGL VHALAHQPGA THNLPHGVCN AILLPVIEEY NRPQATRRFA
RIAQAMGVDT QDMSDEQASH QAIAAIRQLS LQVGIPAGFS ALGIEESDIE GWLDKALADP
CAPCNPRSAD REQIRTLYLQ AL