| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3818 |
|---|
| Symbol | |
|---|
| ID | 6089226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 4208233 |
|---|
| End bp | 4208799 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641598910 |
|---|
| Product | elongation factor P |
|---|
| Protein accession | YP_001722537 |
|---|
| Protein GI | 170026032 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00038] translation elongation factor P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.145028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGTT ATTATAGCAA CGATTTTCGT CCCGGTCTTA AAATCATGTT CGAGGGCGAA
CCTTATGCAG TTGAGTCCAG CGAATTCGTA AAACCCGGCA AAGGCCAGGC TTTTGCGCGT
GTTAAGATGC GCCGCTTACT GACTGGCGGG CGCGTTGAAA AGACCTTCAA ATCAACAGAT
TCTCTGGAAG GTGCCGACGT TAATGATATG AACCTGACTT ACCTGTATAA CGACGGTGAG
TTCTGGCATT TCATGAATAA CGAGACTTAC GAACAGCTGC AAGCTGATGC CAAGGCCGTT
GGTGATAACG GTAAATGGCT GATTGATCAA GCTGAATGTA TCGTAACTCT GTGGAACGGC
CAGCCAATTG CTGTGACCCC ACCAAACTTT GTTGAGCTTG AAATCGTTGA TACTGATCCA
GGCCTGAAAG GCGACACTGC GGGTACAGGT GGTAAGCCTG CAACCTTGAG CACCGGTGCC
GTGGTTAAAG TGCCATTATT CGTACAGGTC GGCGAAATCA TCAAAGTTGA TACCCGCTCT
GGCGAATATG TTTCTCGCGT GAAGTAA
|
|---|
| Protein sequence | MASYYSNDFR PGLKIMFEGE PYAVESSEFV KPGKGQAFAR VKMRRLLTGG RVEKTFKSTD
SLEGADVNDM NLTYLYNDGE FWHFMNNETY EQLQADAKAV GDNGKWLIDQ AECIVTLWNG
QPIAVTPPNF VELEIVDTDP GLKGDTAGTG GKPATLSTGA VVKVPLFVQV GEIIKVDTRS
GEYVSRVK
|
|---|
| |