Gene YPK_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3810 
Symbolpsd 
ID6087931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4198231 
End bp4199112 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content51% 
IMG OID641598902 
Productphosphatidylserine decarboxylase 
Protein accessionYP_001722529 
Protein GI170026024 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00163] phosphatidylserine decarboxylase precursor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0442773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAGACA GTATCAAAAT TAAACTACAA TATTTACTTC CGAAACAAGG GCTAACACAA 
CTCGCTGGCT GGGGAGCGAA TAAGCAAGGC GGCTGGTTGA CCCAGTTAGT CATCAAAGCT
TTTGCCCGTT ATTACAAGGT CGATATGAAA GAAGCGCAGG ATCCTGAATT CTCCGCTTAT
CGTACCTTCA ACGAATTCTT TGTTCGCCCG TTACGCGCAG GTGTACGCCC GGTTGTGGCT
GAAGAAAACC TGTTAGCCCA ACCTGCCGAT GGCGCAATAA GCCAGTTAGG GGCCATCCGA
GAGGGGCAAA TTTTACAGGC GAAAGGCCAT AATTACAGTC TGGAAGCCCT ATTAGCCGGT
AACTATCTGC TGGCTGCTGA ATTCCAAAAT GGGCAGTTTG TTACCACTTA CCTGGCCCCC
CGAGACTACC ACCGGGTGCA TATGCCATGT GATGGTGTGC TACGCGAAAT GATTTATGTG
CCGGGGGATT TGTTCTCGGT CAATCCGTTA ACCGCTGCCA ATGTTCCTAA TTTGTTCGCC
CGTAACGAAC GCGTTATTTG TATCTTTGAT ACCGCCTTTG GCCCAATGGC CCAAATTCTG
GTGGGTGCGA CCATTGTTGG CAGTATAGAG ACCGTCTGGG CGGGGACAAT TACCCCCCCA
CGGGAAGGCG TTATCCGCCG TTGGACATAC CCGCAAGCAG GCTGTGAAGG GGCTATCACC
CTAGAGAAAG GCCAAGAAAT GGGGCGTTTT AAATTAGGCT CAACCGTTAT TAACCTGTTT
GCGGAAGGTA AAGTGTATTT CGCACCACAG CTAAACAGCG GCGCGGTTAC CCGTATGGGT
GAAGTCTTAG CCGAAGCGGT TCCTACTACC CCTTCTTACT AG
 
Protein sequence
MLDSIKIKLQ YLLPKQGLTQ LAGWGANKQG GWLTQLVIKA FARYYKVDMK EAQDPEFSAY 
RTFNEFFVRP LRAGVRPVVA EENLLAQPAD GAISQLGAIR EGQILQAKGH NYSLEALLAG
NYLLAAEFQN GQFVTTYLAP RDYHRVHMPC DGVLREMIYV PGDLFSVNPL TAANVPNLFA
RNERVICIFD TAFGPMAQIL VGATIVGSIE TVWAGTITPP REGVIRRWTY PQAGCEGAIT
LEKGQEMGRF KLGSTVINLF AEGKVYFAPQ LNSGAVTRMG EVLAEAVPTT PSY