Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3779 |
Symbol | |
ID | 6090165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4169596 |
End bp | 4170336 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641598869 |
Product | opacity-associated protein A |
Protein accession | YP_001722499 |
Protein GI | 170025994 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3061] Cell envelope opacity-associated protein A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAGAA TCGCGCCCAG GAGAAGGAAA AATAATCGGG TTTATCAGCC GCTGCTACAC AGTTGGCTAA CCATTAGGCA GAAGGTTCTA CCGGATGCAA AAAATACTGA TGAGCAAAAC CTGATATCCG AAATCAATGC ACCAGAACAG AGGGTGGATC CTGATAACGT GACAGAACCT GCGCTAGCGC CCACACAGAG AAAAGGCGTT CAGAGCATTA AAGAACTGTG GCTAAAAATT TGGCACCTGC CGGACAGTTT TCAGTGGATG GAGCCGTTGC CTTTCTTCCA CCGCCGCGGG GTTATTATCG CTACCACTGT ATTGCTGCTG GCACTGCTGT GGCCCGCTTC CCGTGATAAT ACTGACCTTT CCTTCCCCGT TAGCGCCCCA TCGACCAGCG TGCCATTACA GGCCCAATTA CAAGACAACA ATGACGTACC CGTCCCCCCC AAAGTTTCCC CTTCTGAGAC GACACAAGGA AACTGGCAGA GCTATCAGGT CCAAACGGGT AAAACGTTGG CGCAACTGTT CCGTGATAAT AACCTGCCAG TCAACGATGT TTTTGCCATG GCTCAGGTCG AAGGCAGCGA TAAACCGCTG AGTAACCTGA AAGCTGGGCA AGAGGTCAAG ATTATGCTAG ATGCACAAGG CGCAGTCACC GCACTGGCGA TTGAAACCCC AGAGAACACT GAAGTGCTGT TTTCCCGACA AAACGATGGT AGCTATCGTC GCGAACATTA A
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Protein sequence | MGRIAPRRRK NNRVYQPLLH SWLTIRQKVL PDAKNTDEQN LISEINAPEQ RVDPDNVTEP ALAPTQRKGV QSIKELWLKI WHLPDSFQWM EPLPFFHRRG VIIATTVLLL ALLWPASRDN TDLSFPVSAP STSVPLQAQL QDNNDVPVPP KVSPSETTQG NWQSYQVQTG KTLAQLFRDN NLPVNDVFAM AQVEGSDKPL SNLKAGQEVK IMLDAQGAVT ALAIETPENT EVLFSRQNDG SYRREH
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