Gene YPK_3737 details

Gene Information

• Locus tag: YPK_3737
• Symbol: rrmJ
• ID: 6090229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 4130527
• End bp: 4131156
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641598827
• Product: 23S rRNA methyltransferase J
• Protein accession: YP_001722457
• Protein GI: 170025952
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0293] 23S rRNA methylase
• TIGRFAM ID: [TIGR00438] cell division protein FtsJ

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0024403
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAATA AAAAGCGTTC GGCTAGCTCC AGTCGCTGGT TACAAGAACA CTTTAGCGAT 
AAATATGTAA TTCAGGCACA GAAAAAGGGG CTACGCTCTC GTGCCTGGTT TAAACTTGAT 
GAAATACAAC AGAGCGATAA ACTTTTTAAA CAGGGTATGA CAGTTGTTGA TCTAGGTGCA 
GCCCCTGGTG GTTGGTCCCA ATATGCTGTA ACCCAGATTG GCAGTAAAGG GCGAGTTATC 
GCATGTGATC TTCTACCAAT GGATCCTATC GTTGGTGTCG ATTTCCTTCA GGGCGATTTT 
CGTGATGAAC TGGTCCTGAA AGCTTTACTT GAGCGCGTTG GGGATAAAAA AGTTCAGGTG 
GTCATGTGTG ATATGGCCCC GAATATGAGT GGTACTCCGG CAGTCGATAT ACCTAAATCA 
ATGTATCTGG TTGAATTAGC TTTAGATATG TGTCGTGATG TACTTGCACC AGGTGGAAGT 
TTCCTGGTTA AGGTGTTCCA GGGAGATGGC TTTGATGAAT ACCTACGGGA AATTCGCTCC 
CTGTTTACGA AAGTTAAGAT TCGTAAGCCA GACGCTTCTC GTGCGCGATC GCGTGAAGTG 
TACATTGTAG CGACAGGGCG GAAACTGTAG 

 

Protein sequence

MSNKKRSASS SRWLQEHFSD KYVIQAQKKG LRSRAWFKLD EIQQSDKLFK QGMTVVDLGA 
APGGWSQYAV TQIGSKGRVI ACDLLPMDPI VGVDFLQGDF RDELVLKALL ERVGDKKVQV 
VMCDMAPNMS GTPAVDIPKS MYLVELALDM CRDVLAPGGS FLVKVFQGDG FDEYLREIRS 
LFTKVKIRKP DASRARSREV YIVATGRKL