Gene YPK_3736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3736 
SymbolhflB 
ID6090439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4128536 
End bp4130479 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content47% 
IMG OID641598826 
ProductATP-dependent metalloprotease 
Protein accessionYP_001722456 
Protein GI170025951 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000470783 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGACA TGGCGAAAAA CCTAATTCTC TGGTTAGTTA TTGCAGTCGT CTTGATGTCT 
GTATTCCAGA GCTTTGGTCC CAGCGAATCG AATGGCCGTA GAGTGGATTA CTCTACTTTC
ATGTCCGACG TAACCCAAGA TCAAGTGCGT GAAGCACGTA TCAATGGACG TGAAATTAAC
GTTAGTAAGA AAGATAACAG CAAATATACG ACTTTTATTC CGGTCAATGA TCCAAAGCTG
CTAGATACCT TATTGACTAA AAATGTGAAA GTTGTTGGTG AGCCTCCAGA AGAGCAAAGC
TTACTGGCAT CTATCTTTAT ATCTTGGTTC CCAATGTTGT TATTGATTGG GGTCTGGATC
TTCTTTATGC GTCAAATGCA GGGCGGCGGT GGCAAAGGAG CAATGTCCTT TGGTAAAAGC
AAAGCTCGAA TGCTGACGGA AGATCAGATA AAAACCTCGT TTGCTGATGT TGCTGGTTGT
GACGAAGCAA AAGAAGAGGT CAGTGAATTA GTTGACTACC TGCGTGAGCC AAGCCGTTTC
CAGAAATTGG GCGGTAAAAT TCCTAAAGGC GTGTTGATGG TAGGCCCTCC GGGGACGGGT
AAAACCTTGC TGGCGAAAGC CATTGCAGGT GAAGCTAAAG TGCCATTCTT CACAATTTCT
GGTTCTGACT TCGTAGAAAT GTTCGTTGGT GTCGGTGCAT CCCGTGTCCG TGACATGTTT
GAACAGGCTA AAAAAGCTGC GCCTTGTATC ATCTTCATTG ATGAAATCGA TGCGGTTGGC
CGTCAACGTG GCGCTGGTCT GGGTGGGGGT CATGACGAAC GTGAACAGAC GCTGAACCAA
ATGCTGGTTG AAATGGATGG CTTCGAAGGT AATGAAGGCA TCATTGTTAT TGCGGCAACT
AACCGCCCAG ACGTTCTGGA TCCTGCGTTA TTGCGCCCAG GCCGTTTTGA CCGTCAGGTT
GTCGTTGGTT TACCTGATGT TCGTGGTCGT GAACAAATTC TTAAAGTTCA CATGCGCCGT
GTGCCATTAG ATACCGATAT TGATGCTTCA GTGATCGCTC GTGGTACTCC AGGCTTCTCT
GGTGCTGATT TGGCGAACCT GGTAAACGAA GCTGCATTGT TTGCCGCCCG CGGTAACAAA
CGCGTTGTTT CTATGGTTGA GTTCGAAAAA GCGAAAGACA AAATTATGAT GGGTGCGGAA
CGTCGCTCCA TGGTAATGAC AGAAGCTCAG AAAGAATCTA CGGCCTACCA TGAAGCAGGG
CATGCCATTA TTGGTCGTTT AGTGCCAGAG CATGATCCAG TGCATAAAGT GACGATCATT
CCTCGTGGCC GTGCTCTGGG TGTCACCTTC TTCTTGCCGG AAGGCGATGC AATCAGTGCT
AGCCGCCAGA AGTTGGAAAG TCAGATTTCT ACCTTGTACG GTGGTCGTCT TGCAGAAGAG
ATCATTTATG GCCCGGAAAA AGTGTCTACC GGTGCTTCGA ATGATATCAA AGTGGCAACG
TCTATTGCGC GTAACATGGT AACGCAGTGG GGCTTCTCCG AAAAACTGGG GCCGTTGCTG
TATGCTGAAG AAGAGGGCGA AATTTTCCTC GGCCGTTCTG TAGCGAAAGC TAAGCATATG
TCTGATGAGA CTGCGCGTAT CATCGATCAG GAAGTTAAAT TACTTGTTGA GCGTAACTAT
CAGCGTGCAC GTAAATTGCT GTTAGAAAAT ATGGATGTTT TACACTCCAT GAAAGACGCG
TTGATGAAGT ATGAAACTAT TGATGCGCCA CAGATTGATG ACTTGATGAA TCGCAAAGAA
GTTCGCCCGC CAGCGGGTTG GGACAATGTG ACCAAAAATA AATCATCTGA CAATGACAAT
ACACCAACGG CAACCATGCC GGCTGATGAA CCGAATACTC CAACGTCGGG CAATACAGTG
TCAGAACAGT TGGGTGATAA GTAA
 
Protein sequence
MSDMAKNLIL WLVIAVVLMS VFQSFGPSES NGRRVDYSTF MSDVTQDQVR EARINGREIN 
VSKKDNSKYT TFIPVNDPKL LDTLLTKNVK VVGEPPEEQS LLASIFISWF PMLLLIGVWI
FFMRQMQGGG GKGAMSFGKS KARMLTEDQI KTSFADVAGC DEAKEEVSEL VDYLREPSRF
QKLGGKIPKG VLMVGPPGTG KTLLAKAIAG EAKVPFFTIS GSDFVEMFVG VGASRVRDMF
EQAKKAAPCI IFIDEIDAVG RQRGAGLGGG HDEREQTLNQ MLVEMDGFEG NEGIIVIAAT
NRPDVLDPAL LRPGRFDRQV VVGLPDVRGR EQILKVHMRR VPLDTDIDAS VIARGTPGFS
GADLANLVNE AALFAARGNK RVVSMVEFEK AKDKIMMGAE RRSMVMTEAQ KESTAYHEAG
HAIIGRLVPE HDPVHKVTII PRGRALGVTF FLPEGDAISA SRQKLESQIS TLYGGRLAEE
IIYGPEKVST GASNDIKVAT SIARNMVTQW GFSEKLGPLL YAEEEGEIFL GRSVAKAKHM
SDETARIIDQ EVKLLVERNY QRARKLLLEN MDVLHSMKDA LMKYETIDAP QIDDLMNRKE
VRPPAGWDNV TKNKSSDNDN TPTATMPADE PNTPTSGNTV SEQLGDK