Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3736 |
Symbol | hflB |
ID | 6090439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4128536 |
End bp | 4130479 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641598826 |
Product | ATP-dependent metalloprotease |
Protein accession | YP_001722456 |
Protein GI | 170025951 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000470783 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGACA TGGCGAAAAA CCTAATTCTC TGGTTAGTTA TTGCAGTCGT CTTGATGTCT GTATTCCAGA GCTTTGGTCC CAGCGAATCG AATGGCCGTA GAGTGGATTA CTCTACTTTC ATGTCCGACG TAACCCAAGA TCAAGTGCGT GAAGCACGTA TCAATGGACG TGAAATTAAC GTTAGTAAGA AAGATAACAG CAAATATACG ACTTTTATTC CGGTCAATGA TCCAAAGCTG CTAGATACCT TATTGACTAA AAATGTGAAA GTTGTTGGTG AGCCTCCAGA AGAGCAAAGC TTACTGGCAT CTATCTTTAT ATCTTGGTTC CCAATGTTGT TATTGATTGG GGTCTGGATC TTCTTTATGC GTCAAATGCA GGGCGGCGGT GGCAAAGGAG CAATGTCCTT TGGTAAAAGC AAAGCTCGAA TGCTGACGGA AGATCAGATA AAAACCTCGT TTGCTGATGT TGCTGGTTGT GACGAAGCAA AAGAAGAGGT CAGTGAATTA GTTGACTACC TGCGTGAGCC AAGCCGTTTC CAGAAATTGG GCGGTAAAAT TCCTAAAGGC GTGTTGATGG TAGGCCCTCC GGGGACGGGT AAAACCTTGC TGGCGAAAGC CATTGCAGGT GAAGCTAAAG TGCCATTCTT CACAATTTCT GGTTCTGACT TCGTAGAAAT GTTCGTTGGT GTCGGTGCAT CCCGTGTCCG TGACATGTTT GAACAGGCTA AAAAAGCTGC GCCTTGTATC ATCTTCATTG ATGAAATCGA TGCGGTTGGC CGTCAACGTG GCGCTGGTCT GGGTGGGGGT CATGACGAAC GTGAACAGAC GCTGAACCAA ATGCTGGTTG AAATGGATGG CTTCGAAGGT AATGAAGGCA TCATTGTTAT TGCGGCAACT AACCGCCCAG ACGTTCTGGA TCCTGCGTTA TTGCGCCCAG GCCGTTTTGA CCGTCAGGTT GTCGTTGGTT TACCTGATGT TCGTGGTCGT GAACAAATTC TTAAAGTTCA CATGCGCCGT GTGCCATTAG ATACCGATAT TGATGCTTCA GTGATCGCTC GTGGTACTCC AGGCTTCTCT GGTGCTGATT TGGCGAACCT GGTAAACGAA GCTGCATTGT TTGCCGCCCG CGGTAACAAA CGCGTTGTTT CTATGGTTGA GTTCGAAAAA GCGAAAGACA AAATTATGAT GGGTGCGGAA CGTCGCTCCA TGGTAATGAC AGAAGCTCAG AAAGAATCTA CGGCCTACCA TGAAGCAGGG CATGCCATTA TTGGTCGTTT AGTGCCAGAG CATGATCCAG TGCATAAAGT GACGATCATT CCTCGTGGCC GTGCTCTGGG TGTCACCTTC TTCTTGCCGG AAGGCGATGC AATCAGTGCT AGCCGCCAGA AGTTGGAAAG TCAGATTTCT ACCTTGTACG GTGGTCGTCT TGCAGAAGAG ATCATTTATG GCCCGGAAAA AGTGTCTACC GGTGCTTCGA ATGATATCAA AGTGGCAACG TCTATTGCGC GTAACATGGT AACGCAGTGG GGCTTCTCCG AAAAACTGGG GCCGTTGCTG TATGCTGAAG AAGAGGGCGA AATTTTCCTC GGCCGTTCTG TAGCGAAAGC TAAGCATATG TCTGATGAGA CTGCGCGTAT CATCGATCAG GAAGTTAAAT TACTTGTTGA GCGTAACTAT CAGCGTGCAC GTAAATTGCT GTTAGAAAAT ATGGATGTTT TACACTCCAT GAAAGACGCG TTGATGAAGT ATGAAACTAT TGATGCGCCA CAGATTGATG ACTTGATGAA TCGCAAAGAA GTTCGCCCGC CAGCGGGTTG GGACAATGTG ACCAAAAATA AATCATCTGA CAATGACAAT ACACCAACGG CAACCATGCC GGCTGATGAA CCGAATACTC CAACGTCGGG CAATACAGTG TCAGAACAGT TGGGTGATAA GTAA
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Protein sequence | MSDMAKNLIL WLVIAVVLMS VFQSFGPSES NGRRVDYSTF MSDVTQDQVR EARINGREIN VSKKDNSKYT TFIPVNDPKL LDTLLTKNVK VVGEPPEEQS LLASIFISWF PMLLLIGVWI FFMRQMQGGG GKGAMSFGKS KARMLTEDQI KTSFADVAGC DEAKEEVSEL VDYLREPSRF QKLGGKIPKG VLMVGPPGTG KTLLAKAIAG EAKVPFFTIS GSDFVEMFVG VGASRVRDMF EQAKKAAPCI IFIDEIDAVG RQRGAGLGGG HDEREQTLNQ MLVEMDGFEG NEGIIVIAAT NRPDVLDPAL LRPGRFDRQV VVGLPDVRGR EQILKVHMRR VPLDTDIDAS VIARGTPGFS GADLANLVNE AALFAARGNK RVVSMVEFEK AKDKIMMGAE RRSMVMTEAQ KESTAYHEAG HAIIGRLVPE HDPVHKVTII PRGRALGVTF FLPEGDAISA SRQKLESQIS TLYGGRLAEE IIYGPEKVST GASNDIKVAT SIARNMVTQW GFSEKLGPLL YAEEEGEIFL GRSVAKAKHM SDETARIIDQ EVKLLVERNY QRARKLLLEN MDVLHSMKDA LMKYETIDAP QIDDLMNRKE VRPPAGWDNV TKNKSSDNDN TPTATMPADE PNTPTSGNTV SEQLGDK
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