| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3724 |
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| Symbol | |
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| ID | 6089596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4113067 |
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| End bp | 4115061 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641598812 |
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| Product | ATP-dependent RNA helicase DeaD |
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| Protein accession | YP_001722444 |
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| Protein GI | 170025939 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACTG AGCTTGAAAC CTCTTTTGCT GATCTGGGGC TGTCCGCTCC AATTCTTTCC
GCTCTGACTG ATCTTGGTTA TGAAAAACCA TCTCCTATCC AGTTGGAATG TATTCCACAC
CTGTTAAACG GCCGTGATGT TCTCGGTATG GCGCAAACAG GCAGTGGCAA AACAGCCGCG
TTTGGTCTGC CGCTGTTACA CAATATTAAA GCTGATCTGA AGTCGCCACA GGTTCTGGTG
TTGGCACCAA CCCGTGAATT GGCTGTTCAG GTTGCTGAAG CGCTGTCCAG TTTCTCTAAA
CACATTAATG GCGTCAAGGT GGTGGCCCTG TACGGCGGTC AGCGTTATGA CGTTCAATTA
CGCGCTTTGC GCCAGGGGCC ACAAGTTGTT GTTGGTACCC CAGGTCGTCT GTTAGACCAC
CTGAAACGCG GTACCCTTAA CCTGTCCAAC CTGAGCGGTT TAGTGTTGGA TGAAGCAGAT
GAAATGCTGC GCATGGGCTT TATCGAAGAC GTTGAAACGA TTATGGCGCA GATCCCGGCT
GAACATCAGA CCGCGTTGTT CTCTGCAACC ATGCCAGAAG CGATTCGTCG TATTACGCGT
CGCTTCATGA AAGAACCACA GGAAGTCCGC ATTCAATCTA GCGTGACGAC CCGCCCTGAC
ATTAGCCAGA GCTACTGGAG AGTGGGTGGC GGTTACCGTA AAAATGAAGC GCTGGTACGT
TTCCTGGAAG CTGAAGATTT CGATGCTGCT ATTATTTTCG TACGTACCAA AAATGCGACC
TTGGAAGTAG CAGAAGCCCT TGAGCGTAGC GGCTACAACA GCGCGGCACT GAATGGTGAT
ATGAATCAGG CACTGCGTGA GCAGACGCTG GAGCGTTTGA AAGATGGCCG TCTGGATATT
CTGATTGCAA CTGACGTAGC TGCCCGTGGC TTGGACGTTG AGCGTATCAG CTTGGTCGTA
AACTATGATA TCCCTATGGA TTCAGAGTCT TATGTTCACC GTATCGGTCG TACTGGCCGT
GCAGGTCGTG CAGGTCGCGC GTTGCTGTTC GTTGAGAACC GTGAACGTCG TCTGTTGCAG
AACATCGAAC GCACGATGAA GCTGACGATC CCAGAAGTTG AGTTGCCAAA CGCAGATTTG
CTGAGCGAAC GTCGTTTAGC TAAATTCGCC GCTAAGGTTA GCCAACAACT GGAAAGCAGT
GATTTGGATA TGTACCGCGC ATTGCTGGCT AAGCTGCAAC CGGAAGAAGA GTTTGATATC
GAGACTCTGG CTGCTGCACT GCTGAAAATG GCGCAGGGCG AACGTCCTCT GATCCTGCCA
CCAGAAGCCC CACGCCGTCC GCAGCGTGAA TTCAATTCAC GTGATGACCG TGGTAACGAT
CGTGGTAGCC GTGATCGTGG TGACAGCCGT CGCGATAACC GCTCTGACAG CCGTTCTGCT
GATAGCCGTG ATGGTGGTGA GCGTCCTGCT CGTCGTGAAC GTCGTGATGT TGGCGAGATG
GAGCTGTACC GCATTGAAGT GGGCCGTGAT GATGGTGTTG AAGTTCGCCA TATTGTTGGC
GCTATCGCTA ACGAAGGTGA TATCAGCAGC CGTTATATCG GTAATATCAA GTTGTTTGCT
TCCCACTCAA CGATTGAACT GCCAAAAGGC ATGCCGGGCG AAATGTTATC TCACTTCACC
CGTACCCGTA TCCTGAACAA GCCGCTGAAC ATGCAGCTGT TGGGTGATGC ACAGCCGCAT
GAACGCCGTG AGCGTCCAGC GGGTGGTAAC GGTGGTGAGC GTCGTGGCGG TGGCCGTCCA
TTCAGTGGCG AACGTCGTGA AGGCGCAGGC GCTCCTCCTC GTCGTTCATT TAGCGGCGAT
CGTGCTCCTA CCGGTGGTGG TGAGCGTCGT GGTAACCGCG ATGGTCAGCG TTCTGCGGCC
CCACGTCGTG ATGATGCTGC CGCACCTGCT GCTGCAGCCG CCGCACCAGC CCGTCGTCGC
TTCGGTGATG CATAA
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| Protein sequence | MTTELETSFA DLGLSAPILS ALTDLGYEKP SPIQLECIPH LLNGRDVLGM AQTGSGKTAA
FGLPLLHNIK ADLKSPQVLV LAPTRELAVQ VAEALSSFSK HINGVKVVAL YGGQRYDVQL
RALRQGPQVV VGTPGRLLDH LKRGTLNLSN LSGLVLDEAD EMLRMGFIED VETIMAQIPA
EHQTALFSAT MPEAIRRITR RFMKEPQEVR IQSSVTTRPD ISQSYWRVGG GYRKNEALVR
FLEAEDFDAA IIFVRTKNAT LEVAEALERS GYNSAALNGD MNQALREQTL ERLKDGRLDI
LIATDVAARG LDVERISLVV NYDIPMDSES YVHRIGRTGR AGRAGRALLF VENRERRLLQ
NIERTMKLTI PEVELPNADL LSERRLAKFA AKVSQQLESS DLDMYRALLA KLQPEEEFDI
ETLAAALLKM AQGERPLILP PEAPRRPQRE FNSRDDRGND RGSRDRGDSR RDNRSDSRSA
DSRDGGERPA RRERRDVGEM ELYRIEVGRD DGVEVRHIVG AIANEGDISS RYIGNIKLFA
SHSTIELPKG MPGEMLSHFT RTRILNKPLN MQLLGDAQPH ERRERPAGGN GGERRGGGRP
FSGERREGAG APPRRSFSGD RAPTGGGERR GNRDGQRSAA PRRDDAAAPA AAAAAPARRR
FGDA
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