Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3628 |
Symbol | |
ID | 6089984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4004158 |
End bp | 4005429 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641598712 |
Product | nucleoside transporter |
Protein accession | YP_001722348 |
Protein GI | 170025843 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCATGA GTTTGGTCGG GATGGCAGTA CTGATATTAA TCGCCGTACT GCTTTCAAGT AATGCCAGGG CGATTAATCT TCGCACTGTC ATCGGTGCAT TTATTATCCA AGTGGTGATT GGTGCGCTGG TGCTATATGT ACCGGTTGGC CGCCGTATTC TAGGGGGGAT GTCGGAAGGG GTGGCTAACG TTATTGCTTA TGGTAATGAG GGGATCTCAT TTATTTTTGG CGGATTGGTT TCCGACAAAA TGTTTGAAGT CTTTGGCAGT GGGGGTTTTG TATTCGCCTT ACGTGTATTA CCGGTAATTG TATTCTTCTC TTCATTGATT GCGGTGTTGT ATTACCTCGG CGTCATGCAA ATCGTTATTA AAGTATTGGG CGGTGGTTTA CAAAAACTGC TGGGCACCTC GCGGACGGAG TCTCTTTCTG CCACAGCCAA TATTTTCGTT GGGCAGACAG AAGCGCCGTT AGTTGTTCGC CCCTATATTG CGACCATGAC CCAGTCAGAA CTGTTTGCGG TCATGTGTGG TGGCCTGGCC TCGGTTGCAG GCTCGGTATT GGCCGGGTAT GCGCAAATGG GCGTACCGTT GGAATATTTG ATTGCCGCCT CCTTTATGGC AGCACCGGGC GGGTTACTGT TCGCCAAATT AATGGTGCCT GAAACCGAGC AAACCCACGA TAAAGTTGAT GCTATCGCAC TGATCGCGGA AGAGGACCGC CCAGCTAACG TTATTGATGC CGCAGCTTCT GGGGCAGCCT CTGGTATGCA ACTGGCGCTG AATGTCGGGG CGATGCTATT GGCTTTTATC GCATTGATTG CATTGCTTAA TGGCATTCTG GGGGGGATTG GCGGCTGGTT CGATTATCCG CAACTCTCGC TGGAATTGAT TCTGGGCTGG GTGTTCTCGC CCATCGCTTA TCTGATCGGC GTGCCATGGA GCGAAGCAAT GGTGGCGGGC TCCTTTATCG GCCAAAAGAT TATCGTTAAC GAGTTCGTGG CCTTTATGAA CTTTGGTCAG TATTTGCAGG CGGACGAGTT AGTGAAAGCG GCGGGTTTAC AGGTGCTCTC TGAACACACC AAAGCGATCA TCTCTTTTGC CCTGTGTGGG TTCGCTAACT TGTCTTCGGT AGCTATTCTA CTGGGTGGGC TGGGTAGCAT GGCACCAAAT CGTCGTCATG ATATTGCGCG CTTTGGCCTG AAAGCCGTGG CCGCAGGGAC GTTGTCGAAT TTGATGAGTG CGACGATCGC CGGCTTCTTC CTGGCACTGT GA
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Protein sequence | MLMSLVGMAV LILIAVLLSS NARAINLRTV IGAFIIQVVI GALVLYVPVG RRILGGMSEG VANVIAYGNE GISFIFGGLV SDKMFEVFGS GGFVFALRVL PVIVFFSSLI AVLYYLGVMQ IVIKVLGGGL QKLLGTSRTE SLSATANIFV GQTEAPLVVR PYIATMTQSE LFAVMCGGLA SVAGSVLAGY AQMGVPLEYL IAASFMAAPG GLLFAKLMVP ETEQTHDKVD AIALIAEEDR PANVIDAAAS GAASGMQLAL NVGAMLLAFI ALIALLNGIL GGIGGWFDYP QLSLELILGW VFSPIAYLIG VPWSEAMVAG SFIGQKIIVN EFVAFMNFGQ YLQADELVKA AGLQVLSEHT KAIISFALCG FANLSSVAIL LGGLGSMAPN RRHDIARFGL KAVAAGTLSN LMSATIAGFF LAL
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