| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3625 |
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| Symbol | |
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| ID | 6087915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3999942 |
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| End bp | 4001165 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641598709 |
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| Product | phosphopentomutase |
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| Protein accession | YP_001722345 |
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| Protein GI | 170025840 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.871395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTA CATTTATTAT GGTATTAGAT TCTTTTGGTA TTGGTGCTAG TGCAGATGCC
AAAAAATTTG GTGACGAAGG CGCAGATACA TTAGGTCATA TCGCAGAAGC CTGTGCGCGT
GGTGAAGCCA ACGTGGGCCG TAGCGGCCCG TTGACACTGC CTAACCTGAG CCGTTTAGGG
CTGGGTAAAG CGGCAGAAGA ATCAACCGGT ACCTTCCCCG TTGGCTTGGA TAAGAACGCG
GATATTATTG GTGCTTATGG CTACGCCAGC GAGCTGTCTT CTGGTAAAGA TACGCCGTCA
GGTCACTGGG AAATTGCGGG TGTCCCCGTC TTGTTCGATT GGGGATATTT CAGCGATGTG
GAAAACAGCT TTCCACAGGA ATTGCTGGAT AAACTGGTAA AACGCGCCAA TCTGCCGGGC
TATTTGGGTA ACTGCCACTC TTCCGGTACG GTGATCCTTG ACCAACTGGG TGAGGAGCAT
ATGAAAACCG GGAAGCCGAT TTTCTACACC TCTGCTGACT CCGTATTCCA GATTGCCTGC
CACGAAGAGA CCTTTGGTCT GGATCGTTTG TATGAGCTGT GCGAAATTGC CCGTGAAGAG
CTGACCGACG GTGGCTATAA CATTGGTCGT GTGATTGCAC GTCCGTTTAT CGGCGACAAA
CCGGGTCACT TCCAACGCAC GGGTAATCGT CATGATCTGG CGGTTGAACC CCCTGCGCCG
ACCATGCTGA AAAAACTGGT TGATGAGAAG GGCGGTGAAG TGGTGTCTAT CGGTAAAATT
GCCGATATTT ATGCACAGGT TGGTATCACA CAGAAAGTGA AGGCCACGGG GCTGGATGCG
TTGTTCGATG CCACGATAGA AGAGATGAAA AAAGCGGGCG ATAACACCAT CGTTTTCACT
AACTTTGTTG ATTTTGACTC GTCTTACGGC CACCGCCGTG ATGTTGCTGG TTATGCCGCC
GCGTTAGAAC TATTCGACCG CCGCCTACCG GAATTGATGG CACTGGTCAA AGAAGATGAC
ATCCTGATCC TGACCGCTGA CCACGGTTGT GACCCAACCT GGCCGGGCAC TGACCATACC
CGTGAGCACA TTCCGGTTTT GGTTTACGGC CCGAAAGTTA AACCGGGTTC ATTGGGGCAT
CGTGAGACCT TTGCCGATAT CGGGCAGACA GTTGCGGCGT ATTTTGGGTT GTCGCCAATG
GATTACGGCA AGAACATGCT TTAG
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| Protein sequence | MKRTFIMVLD SFGIGASADA KKFGDEGADT LGHIAEACAR GEANVGRSGP LTLPNLSRLG
LGKAAEESTG TFPVGLDKNA DIIGAYGYAS ELSSGKDTPS GHWEIAGVPV LFDWGYFSDV
ENSFPQELLD KLVKRANLPG YLGNCHSSGT VILDQLGEEH MKTGKPIFYT SADSVFQIAC
HEETFGLDRL YELCEIAREE LTDGGYNIGR VIARPFIGDK PGHFQRTGNR HDLAVEPPAP
TMLKKLVDEK GGEVVSIGKI ADIYAQVGIT QKVKATGLDA LFDATIEEMK KAGDNTIVFT
NFVDFDSSYG HRRDVAGYAA ALELFDRRLP ELMALVKEDD ILILTADHGC DPTWPGTDHT
REHIPVLVYG PKVKPGSLGH RETFADIGQT VAAYFGLSPM DYGKNML
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