Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3597 |
Symbol | |
ID | 6089542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3967155 |
End bp | 3968543 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641598681 |
Product | major facilitator transporter |
Protein accession | YP_001722317 |
Protein GI | 170025812 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCAAG ATCACAATTC ATCTCAAGTC GGCTCATCCC AAATCGACTC ATCTCAACAT CATGTTGATC AACAACATAA TCATAATCGT CGATTGAATA AGCAAGATTA CAAAACACTC ACCTTAGCCG CATTAGGTGG AGCGTTAGAA TTCTATGATT TTATTATTTT TGTCTTCTTT GCTGCGGTTA TTGGTGATCT TTTCTTCCCG GCTGACATGC CTGAATGGCT TCGTCAGGTG CAGACGTTCG GTATTTTTGC TGCGGGTTAC TTGGCTCGCC CATTGGGTGG GATCATCATG GCACATTTTG GTGATTTGGT TGGGCGTAAA AAGATGTTTA CTCTTAGCAT CTTATTAATG GCGTTGCCAA CACTGGCTAT TGGCATGTTG CCGACATATG CCACTATCGG GATCACCGCA CCTTTACTTC TACTATTAAT GCGGGTATTA CAAGGTGCTG CCATTGGTGG CGAAGTTCCC GGTGCATGGG TCTTTGTGGC AGAACATGTG CCACGTAAAC GTATTGGCAT TGCCTGCGGT ACCTTAACGG CCGGTCTGAC TGCTGGGATT TTGTTAGGAT CGCTGGTTGC TACAGTCATG AATACTACGC TGGGCCATCA GGCGATTTTG GAGGGGGGAT GGCGTATACC GTTCTTCTTG GGTGGAATTT TCGGTTTGTT TGCCATGTAC TTACGCCGTT GGTTGCAGGA AACTCCGATC TTTAAAGAAA TGCAGGCGCG TAAAACATTG GCTGAAGAAT TGCCGCTGAA ATCGGTGGTG GTAAACCATA AGAAAGAAGT GGTTGTTTCG ATGCTGCTGA CTTGGTTGCT CTCTGCTGGC ATCGTCGTCG TTATTTTGAT GACACCAACC TATCTACAGA AGCAGTTTAA TGTACCGCCA GAGTTGGCAT TGCAGGCAAA CAGTTTGGCG ATTATCGCAT TGGTTATCGG CTGTGTGGTT GCCGGATTGG CAATTGACCG CTTTGGGGCC AGTAAAACCT TTATCGTTGG CAGCCTGATG CTGGCGATGT CGACATGGTC GTTTTATCAC ACCAATCTGA CTAATCCATC TCAGTTATTT CCCCACTATA TGTTGGCTGG CTTCTGTGTC GGTATTGTTG GTGCAGTGCC TTATGTCATG GTGCGTGCCT TCCCGGCAGA AGTCCGCTTC ACGGGCATCT CTTTCTCGTA CAATGTGGCC TATGCCATTT TTGGTGGTTT AACACCTATT CTGGTGACCT TATGGATGAA GTCATCTGCC ATGGCTCCGG CGTATTACAT GCTGGTGCTA TCGCTGGTGG GATTGTTATT GGGTATTTAT CTGCGTAACG ACATTAATAG TGAAGTGAAA GTTCAGATGC CTAAAAGGGT GATGAACGGA GTTAATTAA
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Protein sequence | MSQDHNSSQV GSSQIDSSQH HVDQQHNHNR RLNKQDYKTL TLAALGGALE FYDFIIFVFF AAVIGDLFFP ADMPEWLRQV QTFGIFAAGY LARPLGGIIM AHFGDLVGRK KMFTLSILLM ALPTLAIGML PTYATIGITA PLLLLLMRVL QGAAIGGEVP GAWVFVAEHV PRKRIGIACG TLTAGLTAGI LLGSLVATVM NTTLGHQAIL EGGWRIPFFL GGIFGLFAMY LRRWLQETPI FKEMQARKTL AEELPLKSVV VNHKKEVVVS MLLTWLLSAG IVVVILMTPT YLQKQFNVPP ELALQANSLA IIALVIGCVV AGLAIDRFGA SKTFIVGSLM LAMSTWSFYH TNLTNPSQLF PHYMLAGFCV GIVGAVPYVM VRAFPAEVRF TGISFSYNVA YAIFGGLTPI LVTLWMKSSA MAPAYYMLVL SLVGLLLGIY LRNDINSEVK VQMPKRVMNG VN
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