Gene YPK_3595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3595 
Symbol 
ID6087413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp3963728 
End bp3964339 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content47% 
IMG OID641598679 
Producthypothetical protein 
Protein accessionYP_001722315 
Protein GI170025810 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0906121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA TCAAGTTGGC GAATCCTGGC CCATTGGGCC TTATGGGCTT TGGGATGACT 
ACCGTCTTGC TAAACCTGCA CAACGCAGGT TTCTTCCCAC TGAGCTCTGT TATTTTGAGC 
ATGGGTATTT TTTACGGCGG CCTGGCACAA ATTCTCGCGG GTCTATTGGA GTATAAAAAA 
GGCAACACAT TTGCCGCCAC CGCATTTACC TCTTATGGCG CATTCTGGTT AAGCTTAGTC 
GGCCTGTTGA TGCTGCCTAA AATGGGCTTG GCAGATGCCA CTGATGCCCA GTTCTTGGGT 
GTGTATTTAG GTCTGTGGGG TATTTTCACA CTGTTTATGT TCATCGGCAC CTTACCCGCT 
AACCGCGCAT TACAGTTTGT TTTCGGCAGC CTGACGATAT TGTTTGCTCT ATTGGCAGTG 
GGTAACTTCA CCGATAATCA TACTTTGTTA ATGTTCGCCG GTTTTGAAGG CATTATCTGT 
GGTGCCAGCG CGATTTATTT AGCAATGGCA GAAGTACTGA ACGAACAGTA TGGCCGTACT 
ATATTACCTA TTGGTGAACC ATTGCCTATT GGTGAACCGA GCCAAACCTT AGAGACCCAA 
GCTGTAATGT AA
 
Protein sequence
MNTIKLANPG PLGLMGFGMT TVLLNLHNAG FFPLSSVILS MGIFYGGLAQ ILAGLLEYKK 
GNTFAATAFT SYGAFWLSLV GLLMLPKMGL ADATDAQFLG VYLGLWGIFT LFMFIGTLPA 
NRALQFVFGS LTILFALLAV GNFTDNHTLL MFAGFEGIIC GASAIYLAMA EVLNEQYGRT 
ILPIGEPLPI GEPSQTLETQ AVM