Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3585 |
Symbol | ispH |
ID | 6089276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3951173 |
End bp | 3952126 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598669 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001722305 |
Protein GI | 170025800 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATAT TGCTGGCTAA TCCACGTGGC TTTTGTGCTG GCGTTGACCG GGCTATCAGT ATTGTTGAAC GTGCGATAGA AATGTATGGC GCGCCAATTT ATGTACGCCA TGAGGTGGTA CATAACCGCT ATGTGGTTGA GAGCCTGTGC GAGCGCGGTG CTATCTTCAT CGAGGAAATT TCAGAGGTGC CAGATGGCTC CATTCTGATT TTCTCGGCCC ATGGTGTGTC ACAGGCTGTT CGGGCAGAGG CCCGTTCGCG TAATTTGACG ATGCTGTTTG ATGCGACCTG TCCATTGGTT ACCAAAGTCC ATATGGAAGT CGCCCGTGCG AGCCGTAAGG GTAAAGAAGC TATTTTGATC GGCCATGCCG GTCATCCAGA AGTGGAAGGG ACCATGGGGC AATACAGCAA CCCTAACGGG GGGATGTATT TGGTTGAATC GCCTGATGAC GTTTGGCAGT TGAACGTCAA GGATGAGAAT AATCTGTGTT TTATGACGCA GACCACCTTA TCGGTCGATG ATACCTCCGC TGTGATCGAT GCGTTGAACA CGCGCTTCCC AAAGATAGTC GGCCCACGCA AAGATGATAT TTGCTATGCC ACAACCAATC GGCAAGAGGC AGTACGTAAT CTGGCAAATG ATGCTGATAT CGTATTGGTC GTGGGGTCGA AAAATTCCTC TAACTCTAAC CGATTGGCCG AACTGGTACA GCGAATGGGT AAGCCCGCTT ATCTGATTGA CTCTGCGGCA GATATTCAGG AATTTTGGTT ACAGGGCGCC CAGTGTATTG GTGTTACCGC GGGTGCATCT GCCCCCGATA TTTTGGTGCA GCAAGTGATT GCACGCTTAA AAGATCTTGG TGCTGGTGAA TCGATTGAAC TCAGCGGTCG CGAAGAAAAT ATTGTTTTTG AAGTACCGAA AGAACTGCGT GTTGAGGTTA AACAGATCGA CTGA
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Protein sequence | MQILLANPRG FCAGVDRAIS IVERAIEMYG APIYVRHEVV HNRYVVESLC ERGAIFIEEI SEVPDGSILI FSAHGVSQAV RAEARSRNLT MLFDATCPLV TKVHMEVARA SRKGKEAILI GHAGHPEVEG TMGQYSNPNG GMYLVESPDD VWQLNVKDEN NLCFMTQTTL SVDDTSAVID ALNTRFPKIV GPRKDDICYA TTNRQEAVRN LANDADIVLV VGSKNSSNSN RLAELVQRMG KPAYLIDSAA DIQEFWLQGA QCIGVTAGAS APDILVQQVI ARLKDLGAGE SIELSGREEN IVFEVPKELR VEVKQID
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