Gene YPK_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3579 
Symbol 
ID6090520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3942382 
End bp3942852 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content47% 
IMG OID641598663 
Producthypothetical protein 
Protein accessionYP_001722299 
Protein GI229597225 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCGTGA GTTTACTGTG GGCATTACTA CAGGACATGG TGTTAGCTGC GATCCCGGCG 
TTGGGCTTTG CCATGGTATT CAATGTACCG GTCCGTGCAC TGCGTTATTG CGCACTATTG
GGGGCAATCG GTCATGGCTC ACGTATGTTG ATGATCCATT TTGGGATGAA TATCGAACTG
GCTTCACTCG TGGCTTCAAT TATGATTGGG GTGATTGGGA TCAATTGGTC ACGTTGGCTG
CTTGCACACC CTAAAGTTTT TACTGTTGCG GCTGTCATTC CCATGTTCCC TGGGATTTCC
GCTTATACCG CCATGATATC GGTGGTTGAG ATTTCTCATC TGGGTTATAG CGAAGCATTA
ATGTCTACAA TGGTGACGAA TTTCTTGAAA GCCTCATTTA TCGTCGGGGC GTTGTCGATT
GGTTTATCAT TGCCAGGACT ATGGTTATAT CGTAAACGCC CTGGTGTATA A
 
Protein sequence
MGVSLLWALL QDMVLAAIPA LGFAMVFNVP VRALRYCALL GAIGHGSRML MIHFGMNIEL 
ASLVASIMIG VIGINWSRWL LAHPKVFTVA AVIPMFPGIS AYTAMISVVE ISHLGYSEAL
MSTMVTNFLK ASFIVGALSI GLSLPGLWLY RKRPGV