Gene YPK_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3571 
Symbol 
ID6090412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3935985 
End bp3937289 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content49% 
IMG OID641598655 
Productpeptidyl-prolyl cis-trans isomerase SurA 
Protein accessionYP_001722291 
Protein GI170025786 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.287067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACT GGAGAACGCT TATTCTCGGA TTGGTCATTT GTGCCAATAC CGCGTTCGCA 
GCACCACAAG AAGTTGATAA AGTTGCCGCG GTGGTTGATA ACGGTGTTGT GTTACAAAGT
GATATCGACG GCCTGCTACA ATCGGTAAAA ATGAACGCAC AACAATCTGG GCAGCAGGTT
CCGGATGATT CGACATTACG CCACCAAATT CTTGAACGCC TCATCATGGA TAATATCCAA
CTGCAGATGG CCAAGAAAAT GGGTATTACC ATCACTGATC AGGCGCTGGA TAAAGCCATT
GCAGATATTG CGGCCCAAAA CCGCATGACG CTCGCTCAGA TGCGTAGCCG TTTAGCCGCT
GATGGCCTTA GCTACGATAC TTACCGTGAG CAAATCCGCA AAGAAATGCT GACATCAGAA
GTCCGTAACA ATGAAGTCCG TCGCCGGATA ACCATTTTGC CGCAAGAAGT TGAATCTCTG
GCTAAGCAGA TGGGTAATCA AGTCAGTGGT GATACCGAAC TGAATCTCAG CCACATCCTG
ATTCCATTGC CAGAAAACCC AACTCAGCAG CAAGTTGATC AAGCTGAAGA TCTGGCGAAC
AAATTGGTTG CTGACATTAA AGGCGGTGCG GATTTTGGTA AATTAGCTAT TGCGAATTCA
GCGGACTCTC AAGCTCTGAA AGGCGGCCAA ATGGGGTGGG GGAAACTGCA GGAGTTACCT
TCACTGTTTG CCGAGAGACT GCAATCGGCG CATAAAGGCG AGATTGTCGG TCCTATCCGT
TCAGGTGTCG GGTTCCATAT TTTGAAAGTG AATGACATGC GTGGGGCGGA TCAAACCATT
TCCGTTACTG AAGTGAACGC CCGGCACATC CTGTTGAAGC CTTCACCAAT GATGACCGAC
GAGCAAGCTC GCGCCAAGTT GGAAGCCGCC GCCGCAGAGA TTAAAAGCGG AAAAACGAGC
TTCGCGACTA TCGCCAAAGA AATTTCGCAG GATCCCGGCT CAGCGATGCA AGGTGGGGAA
CTGGGTTGGG CATCACCCGA TATTTACGAT CCAGCCTTCC GTGATGCATT GATGAAACTG
AAAAAAGGTG AAATCAGTGC CCCTGTTCAC TCTTCCTTTG GCTGGCACCT CATTCAGCTT
GTCGATACCC GTCAGGTAGA TAAAACGGAT GCCGCCCAAA AAGAGCGGGC GTACCGTATG
CTCTTCAACC GTAAATTTGC TGAAGAAGCA CAAACCTGGA TGCAAGAGCA GCGTGCTGCT
GCTTATGTAA AAATTCTTGA TGGTAGTAAT GCACAACCAC AATAA
 
Protein sequence
MKNWRTLILG LVICANTAFA APQEVDKVAA VVDNGVVLQS DIDGLLQSVK MNAQQSGQQV 
PDDSTLRHQI LERLIMDNIQ LQMAKKMGIT ITDQALDKAI ADIAAQNRMT LAQMRSRLAA
DGLSYDTYRE QIRKEMLTSE VRNNEVRRRI TILPQEVESL AKQMGNQVSG DTELNLSHIL
IPLPENPTQQ QVDQAEDLAN KLVADIKGGA DFGKLAIANS ADSQALKGGQ MGWGKLQELP
SLFAERLQSA HKGEIVGPIR SGVGFHILKV NDMRGADQTI SVTEVNARHI LLKPSPMMTD
EQARAKLEAA AAEIKSGKTS FATIAKEISQ DPGSAMQGGE LGWASPDIYD PAFRDALMKL
KKGEISAPVH SSFGWHLIQL VDTRQVDKTD AAQKERAYRM LFNRKFAEEA QTWMQEQRAA
AYVKILDGSN AQPQ