| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3565 |
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| Symbol | |
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| ID | 6087063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3927740 |
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| End bp | 3928300 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641598649 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001722285 |
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| Protein GI | 170025780 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAAAG ATGCGAGCTC GCAAAAATTT ATCGGTAGAA ATAATGCACC TAGAGTGCAA
ATTGAATATG ACGTCGAAAT TTATGGTTCA AATAAGAAAG TAGAGTTGCC TTTTGTAACC
GGCGTGATGG CTGATCTTTC TGGCCACAGG GCAAAGCCTC TTCCCGCCGT TGAAGATCGT
AAATTCCTTA CTTTCGATCA GGATAATTTC GATGCCCGGA TGAGAGCAAT TAAGCCTCGC
CTTAAATTCT ACGTAGATAA CACCTTGAGT GAGGATAACG AACTCCTGGA TATCGAACTG
GATTTTGAGT CAATGGATGA CTTTTCTCCC GGATCGTTAG CGCGGCGTAT TCCTCAAATG
GAAAAACTGC TTGAGGCACG TACCCATCTG GCTGAATTGA TCACCTATAT GGATGGTAAA
ACCAGCGCAG AAGAGGTGGT TAAACAACTG CTTGAACAAC CTGATTTTTT ACAAAATCTT
GCGACCGATG CACAGGGAAC TATTTCGAAG CTCAGCCAGG ATGATGATGT TTTAGTGGAA
GATGACGATG GAGAAAAATA G
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| Protein sequence | MAKDASSQKF IGRNNAPRVQ IEYDVEIYGS NKKVELPFVT GVMADLSGHR AKPLPAVEDR
KFLTFDQDNF DARMRAIKPR LKFYVDNTLS EDNELLDIEL DFESMDDFSP GSLARRIPQM
EKLLEARTHL AELITYMDGK TSAEEVVKQL LEQPDFLQNL ATDAQGTISK LSQDDDVLVE
DDDGEK
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