| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3560 |
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| Symbol | |
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| ID | 6089579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3922178 |
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| End bp | 3923161 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641598644 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001722280 |
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| Protein GI | 170025775 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGCC TCCAGATGCT GAAAAACACG TTTCTGCCGG GTATCTCGGC CAGTCAGGAC
TTTTTCGAGT TGCTGCGTCG GATTGAGCGT GCCACTCCAG AGCAAGGCCG GCTTGGCACC
CAACGTGATC GTAGCCACCT GAGGCTACGT ATTATTCAGC CTGCCGATAT GGGATTTGCA
CCGCGTGAAG TGAGTGATAT CAGGCAAACG CTGAACACTC ATCAGCATCT GGCAGAGATC
ACCATTTTCT GCCGCCATTT TGGTTTATTT GCCCCGTATG GCCCGTTGCC AATACATGTT
ACCGAACATG CTCGTAACGA AGCGTTGGCT AAACGTAATC AGGCCTTTGA ACATTTTGCG
GGCATTCTCA GCCAGCGAAT GGCGATCTTG CATTATCGCT CTTGGGCCCA AATGCACGTC
GCCGTGGGGC ATGATCGCGC GTCAGCCAAT CCCTTTATGA ACCATGTGCG TCAAATCGTG
GGCCTAACGC CGCAGCAAGC GCTGAATTCA CATGTGGATC GGGTACGGCG TTGCTTTCCG
GGGGTGTATC TGCCGGGCAG AGGATCATTA CGCAAATTAC AGGAGATCCT GAGCCTGTAT
TTCTCGGTTC CTATCCGTGT TGAAGCCCGT AAAGGATTGT GGATTGACGA CTCGCGCAAT
ATAGAAAGCC AACGTATGGG ACGGTTGGGT AACACGCGTA TTGGCAGCCG TTTCTTCGAT
GTGCAGCACA GCCTGGTGTT ATCTATTGGT CCGGTATCTG ACCCCCAATA TCTGGATTTT
CAACGCAACA GCAAACGCAT TAACACTCTG GTGCAAATCT GCCATGACTT TGTCCGCCAT
CGGATGGTGC TGGACGTGCA ATTAATCATA CAGACCTCAC CCAATATGGC TTGTCGTCTT
GGCGGTGGAA CGCTCAGCCG CCATAGCTGG TTAAAGCCAG GCTCAGCCTT GAGTATACAG
CCAATTTATA GAACGGTTAC CTAG
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| Protein sequence | MASLQMLKNT FLPGISASQD FFELLRRIER ATPEQGRLGT QRDRSHLRLR IIQPADMGFA
PREVSDIRQT LNTHQHLAEI TIFCRHFGLF APYGPLPIHV TEHARNEALA KRNQAFEHFA
GILSQRMAIL HYRSWAQMHV AVGHDRASAN PFMNHVRQIV GLTPQQALNS HVDRVRRCFP
GVYLPGRGSL RKLQEILSLY FSVPIRVEAR KGLWIDDSRN IESQRMGRLG NTRIGSRFFD
VQHSLVLSIG PVSDPQYLDF QRNSKRINTL VQICHDFVRH RMVLDVQLII QTSPNMACRL
GGGTLSRHSW LKPGSALSIQ PIYRTVT
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