Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3543 |
Symbol | thiP |
ID | 6088186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3896007 |
End bp | 3897614 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641598627 |
Product | thiamine transporter membrane protein |
Protein accession | YP_001722263 |
Protein GI | 170025758 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATCC GCCGTCAGCC GTTAATCGCG CCCTGGCTAT GGCCGGGGTT GCTGGCCGCT GGGCTGATTG TCGCGGTCGC CTTATTGGCG TTCGCCGCTA TTTGGCACCA TGCGCCCACA GCAGATTGGC AAAGTGTCTG GCATGACAGT TATCTGTGGC ATGTGATCCG CTTTACGTTC TGGCAGGCAT TTTTATCCGC CCTGCTGTCG GTGATACCTG CTATCTTTCT GGCGCGGGCG CTGTACCGCC GCAACTTCCC CGGCCGCCAG TTCATGCTGC GTTTATGTGC CATGACGCTG GTTCTGCCGG TGTTAGTCGC GCTATTCGGC ATTCTGACGG TCTATGGCCG TCAGGGGTGG CTGGCTCACC TGTTTGACTG GCTGGGTGTG GATTACCGCT TCTCCCCCTA TGGCTTGCAA GGTATTTTGT TAGCGCATAT CTTCTTTAAC CTACCACTGG CAACCCGCTT GTTGTTACAG TCGCTAGAAG GCATCGCCGT GGAACAACGC CAACTGGCCG CACAACTGGG CATGAACGGC TGGCAGCATT TTCGCTGGGT AGAGTGGCCT TATCTGCGTC GTCAAATCCT GCCCACTGCC GCCCTGATTT TTATGTTGTG CTTTGCCAGC TTTGCCACCG TGTTGTCGCT GGGTGGTGGG CCACAGGCAA CAACCATTGA ACTGGCCATC TATCAGGCAT TGAGCTACGA CTATGATTTA GGCCGTGCCG CATTATTGGC GCTGATACAA CTGGGCTGCT GCCTGGGTTT AGTGGTACTC AGTCAGCGGC TGAACAGCGT GTTGACGGTG GGCAATACGC ATGGGCAAAT ATGGCGTAAT CCGCAAGACA GCGGCTGGGC GCGCCTTGGC GATACCCTGC TGATTTGTAG CGCATTACTC TTGATGGTAC CGCCATTGCT AGCAGTTGTG ATTGATGGCA GTAATAAAAC AATACTGACC GTGTTACAAC AGCCCGCACT CTGGCAAGCG TTCTTTACCT CAGTGACTAT CGCTATTGGT GCCGGGCTAT TGTGTGTCAT CTTAACCATG ATGTTGCTCT GGAGTAGCCG CGAACTGAAA TTACGCCAAC GCGCGGCTTA CGGTCAGGCA TTGGAGGTCA GCGGCATGGT TATTCTGGCG ATGCCCGGCA TTGTGTTGGC AACTGGTTTC TTCTTGTTGC TGAATGATAC GCTGGGATTG CCGCAATCTC CTTATGGGTT GGTGATCCTC ACCAATGCCC TGATGGCCGT GCCCTACGCA TTAAAAGTGC TGGATAACCC GATGCGTGAT CTGGCTGAGC GCTACACTCC GTTGTGTTTA TCACTGGATA TCCGTGGCTG GCACCGTTTA CGTTATATCG AGCTACGCGC CCTGAAACGC CCACTGGCTC AGGCGCTGGC CTTTGCCAGT GTGTTATCTA TCGGCGATTT TGGCGTAGTC GCGTTATTTG GTAATGAACA CTTCCGCACC CTGCCATTTT ATCTTTATCA ACAGATAGGT TCCTACCGCA GCAATGATGG CGCAGTGACT GCCCTGTTGC TTTTGTTGCT CTGCTTCCTG CTGTTTACCC TTATTGAACG ACTGCCGAGC CGCCATGCTA AAGCTTGA
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Protein sequence | MAIRRQPLIA PWLWPGLLAA GLIVAVALLA FAAIWHHAPT ADWQSVWHDS YLWHVIRFTF WQAFLSALLS VIPAIFLARA LYRRNFPGRQ FMLRLCAMTL VLPVLVALFG ILTVYGRQGW LAHLFDWLGV DYRFSPYGLQ GILLAHIFFN LPLATRLLLQ SLEGIAVEQR QLAAQLGMNG WQHFRWVEWP YLRRQILPTA ALIFMLCFAS FATVLSLGGG PQATTIELAI YQALSYDYDL GRAALLALIQ LGCCLGLVVL SQRLNSVLTV GNTHGQIWRN PQDSGWARLG DTLLICSALL LMVPPLLAVV IDGSNKTILT VLQQPALWQA FFTSVTIAIG AGLLCVILTM MLLWSSRELK LRQRAAYGQA LEVSGMVILA MPGIVLATGF FLLLNDTLGL PQSPYGLVIL TNALMAVPYA LKVLDNPMRD LAERYTPLCL SLDIRGWHRL RYIELRALKR PLAQALAFAS VLSIGDFGVV ALFGNEHFRT LPFYLYQQIG SYRSNDGAVT ALLLLLLCFL LFTLIERLPS RHAKA
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