| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3543 |
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| Symbol | thiP |
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| ID | 6088186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3896007 |
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| End bp | 3897614 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641598627 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_001722263 |
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| Protein GI | 170025758 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCC GCCGTCAGCC GTTAATCGCG CCCTGGCTAT GGCCGGGGTT GCTGGCCGCT
GGGCTGATTG TCGCGGTCGC CTTATTGGCG TTCGCCGCTA TTTGGCACCA TGCGCCCACA
GCAGATTGGC AAAGTGTCTG GCATGACAGT TATCTGTGGC ATGTGATCCG CTTTACGTTC
TGGCAGGCAT TTTTATCCGC CCTGCTGTCG GTGATACCTG CTATCTTTCT GGCGCGGGCG
CTGTACCGCC GCAACTTCCC CGGCCGCCAG TTCATGCTGC GTTTATGTGC CATGACGCTG
GTTCTGCCGG TGTTAGTCGC GCTATTCGGC ATTCTGACGG TCTATGGCCG TCAGGGGTGG
CTGGCTCACC TGTTTGACTG GCTGGGTGTG GATTACCGCT TCTCCCCCTA TGGCTTGCAA
GGTATTTTGT TAGCGCATAT CTTCTTTAAC CTACCACTGG CAACCCGCTT GTTGTTACAG
TCGCTAGAAG GCATCGCCGT GGAACAACGC CAACTGGCCG CACAACTGGG CATGAACGGC
TGGCAGCATT TTCGCTGGGT AGAGTGGCCT TATCTGCGTC GTCAAATCCT GCCCACTGCC
GCCCTGATTT TTATGTTGTG CTTTGCCAGC TTTGCCACCG TGTTGTCGCT GGGTGGTGGG
CCACAGGCAA CAACCATTGA ACTGGCCATC TATCAGGCAT TGAGCTACGA CTATGATTTA
GGCCGTGCCG CATTATTGGC GCTGATACAA CTGGGCTGCT GCCTGGGTTT AGTGGTACTC
AGTCAGCGGC TGAACAGCGT GTTGACGGTG GGCAATACGC ATGGGCAAAT ATGGCGTAAT
CCGCAAGACA GCGGCTGGGC GCGCCTTGGC GATACCCTGC TGATTTGTAG CGCATTACTC
TTGATGGTAC CGCCATTGCT AGCAGTTGTG ATTGATGGCA GTAATAAAAC AATACTGACC
GTGTTACAAC AGCCCGCACT CTGGCAAGCG TTCTTTACCT CAGTGACTAT CGCTATTGGT
GCCGGGCTAT TGTGTGTCAT CTTAACCATG ATGTTGCTCT GGAGTAGCCG CGAACTGAAA
TTACGCCAAC GCGCGGCTTA CGGTCAGGCA TTGGAGGTCA GCGGCATGGT TATTCTGGCG
ATGCCCGGCA TTGTGTTGGC AACTGGTTTC TTCTTGTTGC TGAATGATAC GCTGGGATTG
CCGCAATCTC CTTATGGGTT GGTGATCCTC ACCAATGCCC TGATGGCCGT GCCCTACGCA
TTAAAAGTGC TGGATAACCC GATGCGTGAT CTGGCTGAGC GCTACACTCC GTTGTGTTTA
TCACTGGATA TCCGTGGCTG GCACCGTTTA CGTTATATCG AGCTACGCGC CCTGAAACGC
CCACTGGCTC AGGCGCTGGC CTTTGCCAGT GTGTTATCTA TCGGCGATTT TGGCGTAGTC
GCGTTATTTG GTAATGAACA CTTCCGCACC CTGCCATTTT ATCTTTATCA ACAGATAGGT
TCCTACCGCA GCAATGATGG CGCAGTGACT GCCCTGTTGC TTTTGTTGCT CTGCTTCCTG
CTGTTTACCC TTATTGAACG ACTGCCGAGC CGCCATGCTA AAGCTTGA
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| Protein sequence | MAIRRQPLIA PWLWPGLLAA GLIVAVALLA FAAIWHHAPT ADWQSVWHDS YLWHVIRFTF
WQAFLSALLS VIPAIFLARA LYRRNFPGRQ FMLRLCAMTL VLPVLVALFG ILTVYGRQGW
LAHLFDWLGV DYRFSPYGLQ GILLAHIFFN LPLATRLLLQ SLEGIAVEQR QLAAQLGMNG
WQHFRWVEWP YLRRQILPTA ALIFMLCFAS FATVLSLGGG PQATTIELAI YQALSYDYDL
GRAALLALIQ LGCCLGLVVL SQRLNSVLTV GNTHGQIWRN PQDSGWARLG DTLLICSALL
LMVPPLLAVV IDGSNKTILT VLQQPALWQA FFTSVTIAIG AGLLCVILTM MLLWSSRELK
LRQRAAYGQA LEVSGMVILA MPGIVLATGF FLLLNDTLGL PQSPYGLVIL TNALMAVPYA
LKVLDNPMRD LAERYTPLCL SLDIRGWHRL RYIELRALKR PLAQALAFAS VLSIGDFGVV
ALFGNEHFRT LPFYLYQQIG SYRSNDGAVT ALLLLLLCFL LFTLIERLPS RHAKA
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