| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3491 |
|---|
| Symbol | aceE |
|---|
| ID | 6089953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3835648 |
|---|
| End bp | 3838311 |
|---|
| Gene Length | 2664 bp |
|---|
| Protein Length | 887 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641598575 |
|---|
| Product | pyruvate dehydrogenase subunit E1 |
|---|
| Protein accession | YP_001722211 |
|---|
| Protein GI | 170025706 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
|---|
| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0642497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAC GTTTAAATAA TGACGTGGAT CCGATCGAAA CCCGCGACTG GCTACAGGCG
ATCGAATCGG TCATCCGTGA AGAGGGCGTT GAGCGTGCTC AGTATCTGAT TGATCAGGTC
TTGGGCGAAG CCCGTAAAGG TGGCGTGAGT GTTGCTGCAG GTTCGGCAAA TCGTGATTAC
ATCAACACCA TTCCAGTAGA AGATGAACCC GCTTACCCCG GCAATCTGGA CCTGGAGCGT
CGTATTCGTT CTGCTATCCG TTGGAATGCG GTGATGACGG TGTTGCGTGC ATCTAAGAAA
GATCTGGATT TGGGGGGCCA CATGGCGTCC TTCCAGTCTT CCGCTACGTT TTACGAGGTT
TGCTTCAACC ACTTCTTCCG TGCCCGTAAC CAAAAAGACG GCGGCGATCT GGTTTACTTC
CAGGGCCACA TTTCTCCAGG TGTTTACGCG CGCGCCTTCC TGGAAGGCCG TCTGACTGAA
GATCAAATGA ATAACTTCCG TCAGGAAGTT CACGGTAAAG GTCTGTCTTC ATACCCGCAT
CCAAAACTGA TGCCTGAATT CTGGCAGTTC CCGACGGTAT CCATGGGGCT GGGGCCAATT
AGTGCTATTT ATCAGGCCAA GTTCCTGAAA TACCTCTCGC ACCGTGGTCT GAAAGACACC
TCAGCACAGA CTGTTTACGC CTTCTTGGGT GATGGTGAGA TGGATGAGCC GGAATCCAAA
GGTGCGATCA CCATCGCAAC CCGTGAAAAA TTGGATAACC TGGTCTTCGT TATTAACTGT
AACTTGCAGC GCCTTGATGG CCCGGTTACG GGTAACGGCA AAATCATTAA TGAGCTGGAA
GGTATCTTCA GTGGTGCTGG CTGGCAGGTT CTGAAAGTCA TTTGGGGTGG TCGTTGGGAT
GAACTGCTGC GTAAAGATAC CAGCGGCAAA CTGATCCAAT TGATGAACGA AACGCTGGAT
GGCGACTACC AGACGTTTAA ATCTAAAGAT GGCGCCTATG TGCGTGAACA CTTCTTTGGC
CGCTTCCCAG AAACGGCTGC ATTAGTGAAA GACATGACTG ACGATGAGAT CTGGTCTCTG
AACCGGGGTG GTCATGATCC GAAGAAAGTC TTTGCTGCAC TGAAAAAAGC ACAAGAAACT
CAAGGTAAAC CAACGGTTAT CCTGGCCCAT ACCATTAAAG GTTACGGCAT GGGTGAAACG
GCTGAAGGTA AAAATATTGC TCACCAGGTG AAGAAAATGA ATATGGATGG GGTTAGCCAC
TTCCGTGATC GTTTCAATGT GCCAGTTGCC GATGCTGAAA TCGAAAAACT GCCATACATC
ACCTTCGAGA AAGATTCCGA AGAGTATAAA TATCTGCACG AACGCCGTCA GGCGCTGGAA
GGCTATTTGC CAACCCGTAT GCCTAAATTC ACCGAGAAGC TGGAAATCCC TGCCTTGTCA
GATTTCAGCT CCTTGTTGGA AGAGCAGAAT AAAGAGATCT CTACCACTAT CGCCTTCGTG
CGCGCGCTGA ACGTGATGTT GAAGAACAAA TCGATCAAAG ATCGTATTGT TCCCATCATC
GCTGATGAAG CCCGTACTTT TGGTATGGAA GGTCTGTTCC GTCAAATTGG TATTTACAGC
CCGAATGGTC AGCAGTACAC CCCACAAGAC CGTGAACAGG TTGCTTACTA CAAAGAAGAT
GAGAAAGGCC AGATCCTGCA AGAAGGGATT AACGAACTGG GTGCTGCCTC TTCATGGCTG
GCTGCTGCGA CTTCATACAG CACCAACGAT CTGCCAATGA TCCCGTTCTA TATTTACTAC
TCCATGTTCG GTTTCCAACG CATCGGCGAT CTGTGCTGGG CTGCGGGTGA TCAACAAGCA
CGTGGCTTCT TGATCGGGGG TACTTCAGGT CGTACAACCC TGAACGGCGA AGGTCTACAA
CATGAAGATG GTCATAGCCA TATTCAGTCA CTGACTATCC CGAACTGTAT CTCTTACGAT
CCGGCCTATG CTTACGAAGT TGCCGTCATT ATGCATGATG GTCTGGAGCG TATGTACGGT
GAAGCGCAGG AAAACGTTTA TTACTACCTG ACTACGCTGA ACGAAAACTA TCACATGCCA
GCGATGCCAC AGGGCGCAGA AGAAGGTATC CGTAAAGGTA TCTACAAACT GGAAACTGTT
GAAGGTAGCA AAGGCAAAGT GCAGCTGATG AGCTCTGGTG CAATCTTGCG TCACGTTCGC
GAAGCGGCTC AGATTCTGGC TAAAGATTAC GGCGTAGGTT CTGATGTGTA CAGTGTGACC
TCCTTCACTG AACTGGCCCG TGACGGTCAG GATTGTGAGC GTTGGAACAT GCTGCACCCG
ACAGAAACAC CACGTGTTCC TTATGTGGCT CAGGTGATGA ATGATGCCCC TGCGGTTGCG
TCTACTGACT ACATGAAGTT GTTCGCTGAA CAAATTCGTA ACTTTATTCC TGCCAGCGAG
TTCCGTGTAC TGGGCACTGA CGGTTTCGGC CGTTCTGACA GCCGTGAGAA CCTGCGTCAC
CACTTCGAAG TTGATTCTTC TTATGTTGTG GTTGCGGCTC TGGGTGAATT GGCGAAACGC
GGTGACATCG ACACCAGTGT AGTTGCTGAA GCAATTACTA AGTTTGGTAT CGACGCTGAT
AAAGTTAACC CGCGTCTGGC ATAA
|
|---|
| Protein sequence | MSERLNNDVD PIETRDWLQA IESVIREEGV ERAQYLIDQV LGEARKGGVS VAAGSANRDY
INTIPVEDEP AYPGNLDLER RIRSAIRWNA VMTVLRASKK DLDLGGHMAS FQSSATFYEV
CFNHFFRARN QKDGGDLVYF QGHISPGVYA RAFLEGRLTE DQMNNFRQEV HGKGLSSYPH
PKLMPEFWQF PTVSMGLGPI SAIYQAKFLK YLSHRGLKDT SAQTVYAFLG DGEMDEPESK
GAITIATREK LDNLVFVINC NLQRLDGPVT GNGKIINELE GIFSGAGWQV LKVIWGGRWD
ELLRKDTSGK LIQLMNETLD GDYQTFKSKD GAYVREHFFG RFPETAALVK DMTDDEIWSL
NRGGHDPKKV FAALKKAQET QGKPTVILAH TIKGYGMGET AEGKNIAHQV KKMNMDGVSH
FRDRFNVPVA DAEIEKLPYI TFEKDSEEYK YLHERRQALE GYLPTRMPKF TEKLEIPALS
DFSSLLEEQN KEISTTIAFV RALNVMLKNK SIKDRIVPII ADEARTFGME GLFRQIGIYS
PNGQQYTPQD REQVAYYKED EKGQILQEGI NELGAASSWL AAATSYSTND LPMIPFYIYY
SMFGFQRIGD LCWAAGDQQA RGFLIGGTSG RTTLNGEGLQ HEDGHSHIQS LTIPNCISYD
PAYAYEVAVI MHDGLERMYG EAQENVYYYL TTLNENYHMP AMPQGAEEGI RKGIYKLETV
EGSKGKVQLM SSGAILRHVR EAAQILAKDY GVGSDVYSVT SFTELARDGQ DCERWNMLHP
TETPRVPYVA QVMNDAPAVA STDYMKLFAE QIRNFIPASE FRVLGTDGFG RSDSRENLRH
HFEVDSSYVV VAALGELAKR GDIDTSVVAE AITKFGIDAD KVNPRLA
|
|---|
| |