| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3476 |
|---|
| Symbol | |
|---|
| ID | 6090607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3818521 |
|---|
| End bp | 3819291 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641598560 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001722196 |
|---|
| Protein GI | 170025691 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC TGTATTGGAT AGCCTTGCAG AGTATTTGGA TCAAAGAGAT TACGCGGTTT
GCACGTATTT GGATTCAAAC CCTGGTGCCA CCTGTGATTA CGATGTCTCT CTATTTTGTT
ATTTTCGGCA ACCTAATTGG TGCCCGGATT GGCGATATGG GGGGCTTTGA TTACATGCAG
TTTATCGTCC CTGGCTTGAT TATGATGGCG GTGATCACTA ACGCCTATTC TAACGTGGCG
GCATCGTTCT ACGGGGCGAA GTTTCAGCGC AGTATCGAAG AGTTGCTGGT AGCCCCTGTG
CCTACGCATA TTGTTATTAT CGGTTATGTC GGTGGTGGGG TGGCGCGCGG CATTTGTGTC
GGCATTCTGG TGACGATTAT CTCGTTATTC TTCGTGCCAC TGCATGTCCA TTCGTGGCCA
ATGATTGCCT TGACGCTGAT ACTAACGGCC ATTCTATTCT CCCTGGGAGG ATTGTTGAAT
GCAGTCTTTG CCAAGACATT TGATGACATC AGTTTGGTAC CGACTTTTGT GCTGACGCCA
TTGACCTATC TGGGAGGGGT ATTTTATTCG TTATCATTAT TGCCACCTTT CTGGCAGGCA
GTCTCGAAGC TTAACCCTAT CGTCTATATG ATCAGCGGTT TCCGTTATGG GTTCCTCGGT
ATTACTGATG TCTCACTGGC CTACACCATT GGCGTTTTAG TGGTGTTTAT CGCGGTATTC
TATGCGTGGG CGTGGTATTT GATTGAGCGT GGAACCGGGT TACGGACCTA A
|
|---|
| Protein sequence | MTRLYWIALQ SIWIKEITRF ARIWIQTLVP PVITMSLYFV IFGNLIGARI GDMGGFDYMQ
FIVPGLIMMA VITNAYSNVA ASFYGAKFQR SIEELLVAPV PTHIVIIGYV GGGVARGICV
GILVTIISLF FVPLHVHSWP MIALTLILTA ILFSLGGLLN AVFAKTFDDI SLVPTFVLTP
LTYLGGVFYS LSLLPPFWQA VSKLNPIVYM ISGFRYGFLG ITDVSLAYTI GVLVVFIAVF
YAWAWYLIER GTGLRT
|
|---|
| |