Gene YPK_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3468 
SymboldksA 
ID6089742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3810277 
End bp3810732 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content50% 
IMG OID641598552 
ProductRNA polymerase-binding transcription factor 
Protein accessionYP_001722188 
Protein GI170025683 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0312993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAG GGCAAAAACG TAAAACCTCG TCCTTGAGCA TTCTCGCCAT CGCTGGGGTA 
GAGCCTTACC AAGAGAAGCC AGGCGAAGAG TATATGAACG CCGCCCAGCT GTCGCATTTC
AAGCTGATTC TTGAAGCATG GCGCAATCAG CTCAGGGATG AAGTAGATCG TACTGTATCG
CATATGCAAG ACGAAGCTGC TAACTTCCCT GATCCGGTGG ACCGTGCCGC GCAGGAAGAA
GAATTCAGCC TTGAACTTCG TAACCGCGAC CGCGAGCGTA AACTGATTAA AAAGATCGAG
AAGACGCTGA AAAAAGTTGA AGATGACGAT TTTGGTTTCT GCGAGTCTTG TGGCGTAGAA
ATTGGTATCC GTCGTCTTGA GGCACGGCCA ACTGCAGATT TGTGCATTGA CTGTAAAACC
CTGGCCGAAA TCCGCGAAAA GCAGATGGCA GGCTAA
 
Protein sequence
MQEGQKRKTS SLSILAIAGV EPYQEKPGEE YMNAAQLSHF KLILEAWRNQ LRDEVDRTVS 
HMQDEAANFP DPVDRAAQEE EFSLELRNRD RERKLIKKIE KTLKKVEDDD FGFCESCGVE
IGIRRLEARP TADLCIDCKT LAEIREKQMA G