Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3360 |
Symbol | |
ID | 6090904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3686950 |
End bp | 3687717 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641598439 |
Product | hypothetical protein |
Protein accession | YP_001722080 |
Protein GI | 170025575 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.853104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTCTT TACGTCATAC CAAGGCGTTG CCGTTTTATA TCAGCACACT CACTTTATCC TTGTTTAGTG CATCAGCGCT TGCTGATGCG ACTCTCTTTA CAGCCTTGGA TGATCCTTCC TCGGCTAAAA AAAGCTTTGA TGGTTCCGTT GACGCAGGTT ATACCGCTCA GTCCGGCAAT ACGACAAACT CATCATTAGC GGCTAACTCA ACATTGACTT GGTTCCAGCC CAATACAGCT TATAGCTTAT GGGGAGCGGC CCGTAACACC AGCGCCAATA ATCAACGTTC TTCAGAACGT TATCAACTCG GTGGCCGTAC CCGCTATAAT CTGACGGATC GTCATTACAT ATTCGGCCAA GCCAGTTGGC TAACTGATCG TTATAATGGT TTCGACTCCC GCTCGGTATT AACGACAGGT TATGGTCGTC AGGTTATGAC AACCCCACTA CACAATCTGC GGGTAGAATT TGGTCCGGGT GTTCGCCATG ATGAATTTTA TGGCGGTGGC CGAGCGACTA AAGCATTAGC ATATGGTGGG GCGAACTATA CTTATCAGCT CACGGATAAC ACGGTATTCA GTGAAGGTGT TTCCGCATTA GCAAACGAAG AAACGACGTT GAACTCAGAA ACAGCGTTGA ATGTTGCTAT CAATAAAAGC TTCGCATTAC GTTTAGCTTA TATCGCGACC TATAATACTA AGCCGCCAAC CAGTGCGCCC AAAAACACGG ACACTACGAC GTCAATAACG TTGGTTTACG GCCTGTAA
|
Protein sequence | MFSLRHTKAL PFYISTLTLS LFSASALADA TLFTALDDPS SAKKSFDGSV DAGYTAQSGN TTNSSLAANS TLTWFQPNTA YSLWGAARNT SANNQRSSER YQLGGRTRYN LTDRHYIFGQ ASWLTDRYNG FDSRSVLTTG YGRQVMTTPL HNLRVEFGPG VRHDEFYGGG RATKALAYGG ANYTYQLTDN TVFSEGVSAL ANEETTLNSE TALNVAINKS FALRLAYIAT YNTKPPTSAP KNTDTTTSIT LVYGL
|
| |