Gene YPK_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3360 
Symbol 
ID6090904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3686950 
End bp3687717 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content46% 
IMG OID641598439 
Producthypothetical protein 
Protein accessionYP_001722080 
Protein GI170025575 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.853104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCTT TACGTCATAC CAAGGCGTTG CCGTTTTATA TCAGCACACT CACTTTATCC 
TTGTTTAGTG CATCAGCGCT TGCTGATGCG ACTCTCTTTA CAGCCTTGGA TGATCCTTCC
TCGGCTAAAA AAAGCTTTGA TGGTTCCGTT GACGCAGGTT ATACCGCTCA GTCCGGCAAT
ACGACAAACT CATCATTAGC GGCTAACTCA ACATTGACTT GGTTCCAGCC CAATACAGCT
TATAGCTTAT GGGGAGCGGC CCGTAACACC AGCGCCAATA ATCAACGTTC TTCAGAACGT
TATCAACTCG GTGGCCGTAC CCGCTATAAT CTGACGGATC GTCATTACAT ATTCGGCCAA
GCCAGTTGGC TAACTGATCG TTATAATGGT TTCGACTCCC GCTCGGTATT AACGACAGGT
TATGGTCGTC AGGTTATGAC AACCCCACTA CACAATCTGC GGGTAGAATT TGGTCCGGGT
GTTCGCCATG ATGAATTTTA TGGCGGTGGC CGAGCGACTA AAGCATTAGC ATATGGTGGG
GCGAACTATA CTTATCAGCT CACGGATAAC ACGGTATTCA GTGAAGGTGT TTCCGCATTA
GCAAACGAAG AAACGACGTT GAACTCAGAA ACAGCGTTGA ATGTTGCTAT CAATAAAAGC
TTCGCATTAC GTTTAGCTTA TATCGCGACC TATAATACTA AGCCGCCAAC CAGTGCGCCC
AAAAACACGG ACACTACGAC GTCAATAACG TTGGTTTACG GCCTGTAA
 
Protein sequence
MFSLRHTKAL PFYISTLTLS LFSASALADA TLFTALDDPS SAKKSFDGSV DAGYTAQSGN 
TTNSSLAANS TLTWFQPNTA YSLWGAARNT SANNQRSSER YQLGGRTRYN LTDRHYIFGQ
ASWLTDRYNG FDSRSVLTTG YGRQVMTTPL HNLRVEFGPG VRHDEFYGGG RATKALAYGG
ANYTYQLTDN TVFSEGVSAL ANEETTLNSE TALNVAINKS FALRLAYIAT YNTKPPTSAP
KNTDTTTSIT LVYGL