Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3352 |
Symbol | |
ID | 6088910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3678626 |
End bp | 3679357 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641598431 |
Product | outer membrane protein assembly complex subunit YfiO |
Protein accession | YP_001722072 |
Protein GI | 170025567 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.527935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGTA TGAAATATCT GGTGGCTGCC GCCACGTTGA GCCTGGTGCT GACCGGTTGC TCCAGTAACA AGGACGTGGT TCCCGATAAC CCGCCTTCTG AGCTCTATGC TACCGCACAG CAAAAGTTGC AGGACGGTAA CTTTAAGGGA GCTATTACGC AACTAGAAGC GTTAGATAAC CGCTATCCTT TTGGGCCTTA CTCCCAGCAG GTTCAGCTTG ATTTGATTTA TGCGTATTAT AAATCTGCTG ATCTGCCTAT GGCGCAAGCC TCAATCGATC GCTTTATGCG CCTCAATCCC ACCCATCCTA ACATCGATTA CGTATTATAT ATGCGTGGTT TGACGGACAT GGCTCTGGAT GACAGCGCGT TGCAAGGCTT TTTCGGAATT GATCGTTCAG ACCGCGATCC GCAACATGCT CGGGCCGCAT TCCGCGATTT TAACCAGTTG ATTCAAAACT ATCCGAATAG CCAATACGCA ACTGATGCGC AAAAACGCCT GGTGTTCCTG AAAGATCGTC TGGCCAAATA TGAATTGGCC GTGGCGCAAT ATTACACTAA ACGAGGTGCT TACGTCGCGG TTGTTAACCG TGTAGATCAA ATGATGAGAG ATTATCCAGA TACGCAAGCC ACTCGTGATG CCTTGCCGTT GATGGAAAAT GCTTATAAGC AGCTGCAACT GAATGCTCAG GCAGATAAAG TCGCGAAGAT AATTGCGGCC AATCCAGCCT AA
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Protein sequence | MTRMKYLVAA ATLSLVLTGC SSNKDVVPDN PPSELYATAQ QKLQDGNFKG AITQLEALDN RYPFGPYSQQ VQLDLIYAYY KSADLPMAQA SIDRFMRLNP THPNIDYVLY MRGLTDMALD DSALQGFFGI DRSDRDPQHA RAAFRDFNQL IQNYPNSQYA TDAQKRLVFL KDRLAKYELA VAQYYTKRGA YVAVVNRVDQ MMRDYPDTQA TRDALPLMEN AYKQLQLNAQ ADKVAKIIAA NPA
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