Gene YPK_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3349 
Symbol 
ID6088023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3674077 
End bp3676650 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content48% 
IMG OID641598428 
Productprotein disaggregation chaperone 
Protein accessionYP_001722069 
Protein GI170025564 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000133942 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTGG ATCGTCTTAC CAGTAAATTC CAGCTTGCCC TCGCCGATGC CCAGTCTTTA 
GCTCTTGGGC GCGACAACCA GTTTATTGAA CCGTTACATT TGATGAGCGC ACTGCTTAAT
CAGGATGGGG GGACGGTTCG CCCTTTATTG ACCTCGGCAG GGATTAATGT TGCACGTTTA
CGTAGCGACA TTGAGCAAGC TTTAGGTCGT CTTCCTCAAG TTGAAGGCAC CGGCGGTGAT
GTTCAACCAT CAAACGAGCT GGTTCGTGTA TTAAATCTTT GCGACAAATT AGCGCAGAAA
CGTTCGGATA AGTTTATCTC TTCCGAGCTG TTCGTCCTGG CCGTACTTGA AGATCGTGGC
ACGTTAACTG ACATGTTAAA GGCTGCAGGT GCAACCGTCG CTATAATAGA TAAGGCAATT
GAAACCATGC GTGGTGGTGA CAAAGTCGAT GATCAGGGTG CTGAAGATCA GCGCCAGGCG
TTGAAAAAAT TCACTATCGA CCTGACTGAG CGTGCCGAGC AAGGCAAACT CGATCCGGTT
ATTGGCCGTG ATGAAGAAAT TCGCCGTACT ATTCAGGTAT TACAACGTCG AACCAAAAAT
AACCCAGTGC TGATTGGTGA GCCTGGGGTG GGTAAAACCG CTATTGTGGA AGGTTTGGCG
CAACGCATTG TGAACGGCGA AGTGCCAGAA GGCTTGAAGC ATAAGCGTGT ACTCTCATTA
GATATGGGGT CGCTGATTGC CGGTGCCAAA TATCGTGGTG AATTTGAAGA GCGTTTGAAA
GGCGTACTGA ACGACTTATC AAAACAAGAA GGCAGTGTGA TCTTGTTTAT TGATGAGTTG
CATACCATGG TCGGTGCCGG TAAAGGCGAT GGGGCGATGG ATGCCGGTAA CATGCTGAAA
CCTGCATTAG CGCGAGGTGA GTTACATTGT GTGGGGGCCA CTACCCTCGA TGAATACCGT
CAATATATAG AGAAAGATGC TGCGCTCGAG CGGCGTTTCC AAAAAGTGTA TGTTGCGGAA
CCAACGGTAG AAGACACTAT CGCTATTTTA CGTGGGCTGA AAGAGCGCTA CGAACTGCAC
CATCACGTGC AGATCACTGA CCCAGCTATT GTGGCAGCCG CAACATTGTC ACACCGGTAT
ATTTCTGATC GTCAGTTACC GGATAAAGCT ATCGACCTCA TTGATGAGGC AGGTTCCAGC
ATCCGTATGC AAATGGATTC AAAACCCGAA TCATTGGATC GTCTGGAGCG CCGGATTATT
CAGCTTAAAC TGGAACAGCA GGCCCTAAAA AAAGAGTCAG ATGACGCCAG TAAAAAACGG
TTGGAAATGC TCAATACTGA GTTAGAGCAA AAAGAGCGTG AATATTCTGA ACTGGAAGAA
GAGTGGAAAG CAGAAAAAGC TTCACTCACC GGGACTCAGA ATATCAAGAC GGAGTTGGAA
CAAGCTAAAA TCACCTTAGA ACAAGCTCGT CGAGTAGGTG ATCTGGCTCG GATGTCAGAA
CTTCAGTACG GTACAATCCC TGAGCTGGAA AAACAGCTGG CTGCGGCAAC CGCGCTAGAA
GGGAAAACCA TGAAGTTGCT GCGTAACCGT GTCACAGAAA TCGAAGTTGC TGAAGTCCTG
GCTCGCTGGA CCGGTATCCC GGTATCTCGC ATGTTGGAAA GTGAGCGGGA TAAGCTGCTA
CGTATGGAAC AGGACTTGCA TCAACGAGTC ATTGGGCAAG ATGAAGCTGT TGAAGCCGTC
TCCAACGCTA TCCGTCGGAG TCGCGCAGGG TTGTCTGATC CAAACCGACC AATTGGTTCG
TTCTTATTCT TAGGGCCAAC GGGGGTTGGT AAAACTGAAT TGTGTAAAGC GTTGGCAACG
TTCTTGTTCG ACAGTGACGA TGCCATGGTG CGAATCGACA TGTCCGAGTT TATGGAGAAA
CATTCCGTAT CGCGGTTGGT CGGTGCACCT CCTGGCTATG TTGGGTATGA AGAAGGTGGC
TATCTGACGG AAGCGGTTCG TCGTCGTCCT TATTCTGTGA TTTTGCTGGA TGAAGTTGAA
AAAGCACATC CAGATGTTTT CAACATATTG TTACAGGTAT TGGATGATGG TCGTTTGACC
GACGGGCAGG GGAGAACTGT CGACTTTCGT AACACGGTAG TCATTATGAC CTCTAACCTT
GGTTCAGATT TGATTCAGGA ACATTTCGGC CAAATGAATT ACAGCGAAAT GAAGACAGTG
GTTATGGATG TTGTTAGTCA CCACTTCCGT CCTGAATTTA TTAACCGTAT AGATGAGGTT
GTTGTCTTCC ACCCACTTGG TCGGGCGCAC TTGGCTTCTA TTGCCAACAT TCAACTGGAG
CGTTTGTATA AACGTCTGGA AGAACGTGGC TATGAAGTGA AGATTACTCA GCCTGCATTG
GAATTCTTGG GTGAAGCTGG CTTCGACCCT GTTTATGGGG CGCGGCCATT AAAACGTGCA
ATTCAGCAGG AAATTGAGAA CCCGCTGGCA CAGCAGATAC TTTCTGGCAA ACTAATACCG
GGAATCCCCG TGACTTTAGA TGTTGAAAAT GGGCATATTA TTGCTAAGCA GTAA
 
Protein sequence
MRLDRLTSKF QLALADAQSL ALGRDNQFIE PLHLMSALLN QDGGTVRPLL TSAGINVARL 
RSDIEQALGR LPQVEGTGGD VQPSNELVRV LNLCDKLAQK RSDKFISSEL FVLAVLEDRG
TLTDMLKAAG ATVAIIDKAI ETMRGGDKVD DQGAEDQRQA LKKFTIDLTE RAEQGKLDPV
IGRDEEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GLKHKRVLSL
DMGSLIAGAK YRGEFEERLK GVLNDLSKQE GSVILFIDEL HTMVGAGKGD GAMDAGNMLK
PALARGELHC VGATTLDEYR QYIEKDAALE RRFQKVYVAE PTVEDTIAIL RGLKERYELH
HHVQITDPAI VAAATLSHRY ISDRQLPDKA IDLIDEAGSS IRMQMDSKPE SLDRLERRII
QLKLEQQALK KESDDASKKR LEMLNTELEQ KEREYSELEE EWKAEKASLT GTQNIKTELE
QAKITLEQAR RVGDLARMSE LQYGTIPELE KQLAAATALE GKTMKLLRNR VTEIEVAEVL
ARWTGIPVSR MLESERDKLL RMEQDLHQRV IGQDEAVEAV SNAIRRSRAG LSDPNRPIGS
FLFLGPTGVG KTELCKALAT FLFDSDDAMV RIDMSEFMEK HSVSRLVGAP PGYVGYEEGG
YLTEAVRRRP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSDLIQEHFG QMNYSEMKTV VMDVVSHHFR PEFINRIDEV VVFHPLGRAH LASIANIQLE
RLYKRLEERG YEVKITQPAL EFLGEAGFDP VYGARPLKRA IQQEIENPLA QQILSGKLIP
GIPVTLDVEN GHIIAKQ