| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3339 |
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| Symbol | |
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| ID | 6090822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 3658856 |
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| End bp | 3660391 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641598416 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001722061 |
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| Protein GI | 170025556 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACAAA AACCGCTTGA AGGAGCACCA CTCGCCTGGA TGACGGTGGC GCTTTCATTA
GCGACCTTCA TGCAGGTGCT GGACTCCACC ATTGCTAACG TGGCCATCCC AACGATTGCG
GGTGATTTAG GCTCGTCCAA CTCGCAAGGG ACGTGGGTAA TCACCTCATT CGGGGTGGCG
AATGCAATTT CGATCCCCGT CACCGGCTGG CTAGCCAAGC GAGTCGGTGA AGTGCGGCTG
TTCTTGTGGT CAACAGGCTT GTTTGTGCTG GCCTCATGGC TATGCGGCAT GTCAAACAGC
TTGGGGATGC TTATCTTCTT CCGCGTTATC CAGGGGCTGG TCGCTGGGCC ATTGATCCCA
CTCTCGCAAA GCCTGCTACT CAACAACTAT CCGCCGGCGA AGCGAAGTAT GGCCCTGGCG
TTGTGGTCGA TGACGATTGT TGTCGCCCCG ATATTTGGGC CGATCCTCGG CGGTTATATC
AGTGATAACT ATCACTGGGG CTGGATCTTC TTTATCAATA TCCCTATCGG TCTGGTGGTG
GTCCTGCTGG CGGGCAGTAC CCTGAAAGGA CGAGAGACCA AAACAGAGAT CAGACCCATT
GATACCATCG GGCTGGTGTT ATTGGTGGTC GGTATTGGTG CCTTGCAAAT CATGCTTGAT
CAAGGCAAGG AGCTGGATTG GTTTAACTCG ACAGAAATTA TCGTCCTGAC CGTGGTGGCT
GTCGTGGCTA TTACCTTCCT GATCGTCTGG GAGTTAACCG ACGATCATCC GGTGATTGAT
TTGTCGCTGT TTAAATCGCG CAACTTTACC ATTGGCTGTT TGTGTCTCAG CCTGGCCTAT
ATGTTGTACT TTGGTGCGAT TGTCTTACTG CCCCAGCTAT TGCAGGAGGT GTATGGCTAT
ACCGCCACCT GGGCCGGATT GGCATCGGCA CCGGTGGGTA TACTGCCCGT GCTGCTGTCG
CCATTAATTG GTCGTTTTGC CCATCGAATT GATATGCGCC AGTTAGTGAC ATTTAGCTTC
ATTATGTATG CGGTGTGTTT CTACTGGCGA GCATATACCT TCGAACCGGG GATGGATTTT
GGTGCCTCAG CATGGCCGCA GTTCTTCCAA GGCTTCGCCA TTGCCTGCTT CTTCATGCCA
TTGACCACGA TTACGTTATC CGGTTTGCCA CCGGAGCGAA TGGCCGCGGC ATCCAGTTTG
TCTAACTTTA TGCGAACACT GGCAGGGTCG ATTGGTACCT CAATCACCAC CACCCTCTGG
ACGCAAAGAG AGTCGTTGCA CCACGCGCAG TTGACGGAGT TTGTTAACCC GTACAACCCG
AACGCGACGC AGGCCTACCA GGAGTTGGAA AAACTGGGGA TGAGCCAGCA ACAGGCTTCG
GCCTACCTGG CCCGTGAAAT TACCAATCAG GGGCTGATTA TCTCTGCGAA TGAGATTTTC
TGGCTCTCGG CGGGGGTGTT CCTAATGCTG CTGGCCCTGA TCTGGTTTGC CCGCCCTCCT
TTCACCTCGG GTGGCGGCGG CGGCGGTGCG CATTAA
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| Protein sequence | MAQKPLEGAP LAWMTVALSL ATFMQVLDST IANVAIPTIA GDLGSSNSQG TWVITSFGVA
NAISIPVTGW LAKRVGEVRL FLWSTGLFVL ASWLCGMSNS LGMLIFFRVI QGLVAGPLIP
LSQSLLLNNY PPAKRSMALA LWSMTIVVAP IFGPILGGYI SDNYHWGWIF FINIPIGLVV
VLLAGSTLKG RETKTEIRPI DTIGLVLLVV GIGALQIMLD QGKELDWFNS TEIIVLTVVA
VVAITFLIVW ELTDDHPVID LSLFKSRNFT IGCLCLSLAY MLYFGAIVLL PQLLQEVYGY
TATWAGLASA PVGILPVLLS PLIGRFAHRI DMRQLVTFSF IMYAVCFYWR AYTFEPGMDF
GASAWPQFFQ GFAIACFFMP LTTITLSGLP PERMAAASSL SNFMRTLAGS IGTSITTTLW
TQRESLHHAQ LTEFVNPYNP NATQAYQELE KLGMSQQQAS AYLAREITNQ GLIISANEIF
WLSAGVFLML LALIWFARPP FTSGGGGGGA H
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