Gene YPK_3309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3309 
SymbolfadE 
ID6090083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3622221 
End bp3624668 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content51% 
IMG OID641598386 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001722031 
Protein GI170025526 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.831858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTTC TTAGCATTGT TGCCTTACTG GTTCTTATTA GTGTGTTGTT CTATCACCGG 
GTGAACCTTT ATCTCAGCAG TTTAACTCTT CTGGTTTACA CCGCCGCTTT GGGCGCCTCG
CAGTTATGGT CATTCTGGGT ATTATTACCA TTGGTGATTA TTCTGTTGCC ACTGATCCTA
ACGCCGCTGC GCAAGTCACT GTTCTCTGCG CCAGCATTAC GGATTTTCCG TAGCGTCATG
CCTGCTATGT CACGTACAGA AAAAGAAGCG ATTGATGCAG GGACTACCTG GTGGGAAGGT
GATTTATTCC GAGGGGCTCC TGACTGGAAA AAATTACACA ACTATCCAAA ACCGCAATTA
ACCGCCGAAG AGCAAGCCTT TATCGATGGG CCGGTTGAAG AAGCCTGTCG TATGGCTAAT
GACTTCCAGA TAACCCATGA ACTGGCTGAT TTGCCACCAG AATTATGGGA TTACCTGAAA
GAAAAACGCT TCTTCGCGAT GATCATTAAG AAAGAATATG GGGGTCTTGA ATTTTCTGCT
TATGCTCAGG CCCGCGTGTT ACAGAAACTA GCCGGGGTCT CAGGTATTCT GGCCATCACC
GTTGGCGTAC CAAACTCCCT TGGCCCAGGT GAATTATTGC AACATTACGG CACTGAAGAG
CAAAAAAATC ATTATCTGCC AAGATTAGCC CGGGGTGACG AGATCCCTTG CTTTGCACTA
ACCAGCCCGG AAGCCGGTTC TGATGCCGGT GCGATCCCTG ATGTTGGTAT TGTCTGTATG
GGCGAGTGGC AAGGTAAACA GGTTCTCGGC ATGCGCCTAA CCTGGAACAA GCGCTATATT
ACGCTGGCCC CCATCGCGAC GGTTCTGGGG CTGGCCTTCA AATTATCGGA CCCCGAACAC
TTACTGGGCG ATACGGTAGA CTTGGGGATT ACCTGTGCAC TGATCCCAAC CCATACACCA
GGAGTAGAGA TCGGGCATCG TCACTTCCCA CTCAATATAC CGTTCCAAAA TGGCCCTACC
CGCGGTAACG ATATTTTTGT CCCCATTGAT TACATCATCG GCGGCCCTCA AATGGCCGGT
CAAGGCTGGC GGATGCTGGT GGAATGCCTG TCTGTGGGGC GTGGAATCAC CTTGCCTTCC
AATGCCACTG GTAGCCTGAA AAGTGTGGCG ATGGGGATCG GTGCTTACGC TTATATTCGC
CGTCAATTCA AAATCTCCAT CGGTAAGATG GAGGGGATTG AAGAGCCACT GGCGCGGATC
GCCGGTAACA CTTATGTGAT GGATGCAGCC GCAACTTTAA TCACCAGCGG CATTATGATG
GGCGAGAAAC CGGCCGTCTT GTCTGCCATT GTTAAATATC ACTGTACACA CCGTGGTCAA
CGCGCCGTGA TGGATGCCAT GGATATCGCC GGTGGTAAAG GGATCTGCCT TGGCCCCGCT
AACTTTGTCG CCCGTGGTTA TCAGGGCGCA CCCATCGGTA TCACCGTCGA AGGCGCAAAT
ATTCTGACCC GCAGTATGAT TATCTTTGGT CAGGGTGCTA TCCGTTGCCA TCCATTTGTT
CTCGATGAGA TGGCGGCTGC GCAATCCAAT GACGTTGCCG CTTTCGATAA AGCCCTGTTT
GGTCACTTGG GCCACGTCGG TAGTAGTATG GTACGCAGCT TCTGGCTGGG CCTGACCAAT
GGCCGCACCA GTGCAACACC AGTCAAAGAC AGCACCCGTC GTTATTATCA ACAACTAAAC
CGTCTGAGCG CTAACTTGGC CTTGCTGTCT GATGTTTCAA TGGGCGTGCT GGGTGGTAGC
CTAAAACGTC GCGAACGTAT CTCTGCCCGT TTGGGTGATA TCCTCAGCCA ACTGTATTTA
GCATCCGCCA CACTGAAACG CTATGAAGAT GAAGGCCGTC AGAAAGAGGA TCTGCCGTTG
GTACATTGGG GGGTACAAGA TGCTCTGTAT CAGGCCGAAC AAGCACTGGA TGACTTGCTG
CGTAACTTCC CGAATAGCGT GATTGCTGGA TTGATGCGCG TCGTGGTCTT CCCGTTGGGC
CGTGTACATC GGGCACCGTC CGATCATCTG GATCACCAGT TGGCGCAATT GCTACAAGTT
CCATCAGCCA CCCGTAGCCG TATCGGTCGT GGTCAGTACC TGACACCAAG TGAATTTAAC
CCGGTAGGGT TATTGGAAGC GGCCTTACTG GATGTGATTG CCGCAGAACC GATTCACAAA
CGCCTGAGTA AAGAAGCGGG TAAGAGCCTG CCCTTTATTC GCTTGGATCA GTTAGCTAAA
CACGCCTTGG CAGAAGGGAA AATCAGCGCC GAAGAGGCCG CGTTGCTGAC TAAAGCAGAA
AACAGCCGCC TGCGTTCTAT TAATGTGGAT GAGTTTGACG CCAGCGCCTT GGCAGCAAAC
CCAGTAGTCA AAAAACCGGC TAAACAGCAG CAAACTGAAG CCGCATGA
 
Protein sequence
MIVLSIVALL VLISVLFYHR VNLYLSSLTL LVYTAALGAS QLWSFWVLLP LVIILLPLIL 
TPLRKSLFSA PALRIFRSVM PAMSRTEKEA IDAGTTWWEG DLFRGAPDWK KLHNYPKPQL
TAEEQAFIDG PVEEACRMAN DFQITHELAD LPPELWDYLK EKRFFAMIIK KEYGGLEFSA
YAQARVLQKL AGVSGILAIT VGVPNSLGPG ELLQHYGTEE QKNHYLPRLA RGDEIPCFAL
TSPEAGSDAG AIPDVGIVCM GEWQGKQVLG MRLTWNKRYI TLAPIATVLG LAFKLSDPEH
LLGDTVDLGI TCALIPTHTP GVEIGHRHFP LNIPFQNGPT RGNDIFVPID YIIGGPQMAG
QGWRMLVECL SVGRGITLPS NATGSLKSVA MGIGAYAYIR RQFKISIGKM EGIEEPLARI
AGNTYVMDAA ATLITSGIMM GEKPAVLSAI VKYHCTHRGQ RAVMDAMDIA GGKGICLGPA
NFVARGYQGA PIGITVEGAN ILTRSMIIFG QGAIRCHPFV LDEMAAAQSN DVAAFDKALF
GHLGHVGSSM VRSFWLGLTN GRTSATPVKD STRRYYQQLN RLSANLALLS DVSMGVLGGS
LKRRERISAR LGDILSQLYL ASATLKRYED EGRQKEDLPL VHWGVQDALY QAEQALDDLL
RNFPNSVIAG LMRVVVFPLG RVHRAPSDHL DHQLAQLLQV PSATRSRIGR GQYLTPSEFN
PVGLLEAALL DVIAAEPIHK RLSKEAGKSL PFIRLDQLAK HALAEGKISA EEAALLTKAE
NSRLRSINVD EFDASALAAN PVVKKPAKQQ QTEAA