| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3296 |
|---|
| Symbol | |
|---|
| ID | 6090687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3609473 |
|---|
| End bp | 3610531 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641598373 |
|---|
| Product | DNA polymerase IV |
|---|
| Protein accession | YP_001722018 |
|---|
| Protein GI | 170025513 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAA TTATTCATGT CGATATGGAT TGCTTCTTCG CGGCAGTAGA AATGCGCGAC
GACCCTCGCC TGCGTGATAT CCCCCTTGCG ATTGGTGGCA GTAAGGAGCG GCGTGGCGTG
ATCAGTACCG CTAATTATCC CGCTCGGCGT TATGGTGTTC GCAGCGCTAT GCCAACGGCG
ATGGCGTTTA AACTCTGCCC ACAGTTAACA TTGCTGCCTG GTAGAATGGC GGCTTATAAA
GAGGCCTCGC AGCATATTCG CGAAATTTTT GCCCGTTATA CCCCATTGAT TGAACCACTG
TCATTGGATG AGGCCTATTT GGATGTTTCT GATAGCTTGG CGTGCGGTGG CTCTGCAACA
TTAATAGCTC AAGAGATCCG CCAGTCTATC GCTAGTGAGC TGAACCTGAC AGCCTCCGCG
GGGATTGCCC CGATAAAATT TCTTGCCAAA ATCGCCTCAG AGCTGAATAA ACCCAATGGC
CAGTATGTGA TTACACCGAA TCAGATCCAG CCCTTCCTAC AGGATTTACC GCTGAGTAAA
ATTCCCGGTG TTGGTGCCGT CACCGCCAAA CGTTTACAGG CGCTGGGGTT GGTAACCTGT
GGCGAGATAC AAAAGTATCC GTTGGCAGAA TTGTTAAAAC ATTTTGGTAA GTTTGGCCGC
GTATTGTGGG AGCGTAGTCA CGGTATTGAT GAACGTGAAA TATCCCCAGA TCGTCTACGT
AAATCCGTTG GTGTGGAGAA AACACTGGCC GAGGATATTT ATGACTGGGA AAGTTGTGAG
GCGTTGATCG AAGAACTTTA TCTTGAACTG GAAACTCGTT TACGTAAGGT AAAGCCGGAC
CTACACATTG CCCGGCAGGG CGTTAAGCTA AAATTTCATG ATTTTCAGCA GACCACGCAA
GAACACACAT GGCCAGTATT GAATAAAGCA GATTTACTGC AAATTGCCCA CGCCGCATGG
AATGAACGGC GGGCCGAGCG GGGAGTCCGT TTGGTCGGGC TGCATGTTAC GTTGCTGGAT
CCACAACTTG AGCGGCAATT ATTGCTTGAT TGGGGCTAG
|
|---|
| Protein sequence | MRKIIHVDMD CFFAAVEMRD DPRLRDIPLA IGGSKERRGV ISTANYPARR YGVRSAMPTA
MAFKLCPQLT LLPGRMAAYK EASQHIREIF ARYTPLIEPL SLDEAYLDVS DSLACGGSAT
LIAQEIRQSI ASELNLTASA GIAPIKFLAK IASELNKPNG QYVITPNQIQ PFLQDLPLSK
IPGVGAVTAK RLQALGLVTC GEIQKYPLAE LLKHFGKFGR VLWERSHGID EREISPDRLR
KSVGVEKTLA EDIYDWESCE ALIEELYLEL ETRLRKVKPD LHIARQGVKL KFHDFQQTTQ
EHTWPVLNKA DLLQIAHAAW NERRAERGVR LVGLHVTLLD PQLERQLLLD WG
|
|---|
| |