Gene YPK_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3257 
SymbolribH 
ID6087077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp3561149 
End bp3561619 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID641598334 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001721979 
Protein GI170025474 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0550379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTA TCGAAGGTGT TGTTGCTACT CCTAATGCCC GTGTGGCGAT TGCGATTGCG 
CGTTTTAACA ACTTTATCAA CGACAGCCTG CTGGATGGTG CAATAGATGC CCTGAAACGC 
ATTGGTCAGG TGTCCGATGA CAACATTACC GTTGTCTGGG TGCCAGGCGC TTATGAGTTG 
CCGTTAGTTG CTAATGTATT AGCAAAAACA AATCGTTATG ATGCGGTGAT TGCACTGGGT 
ACGGTGATCC GTGGGGGCAC AGCGCACTTT GAGTATGTTG CTGGCGAAGC AAGTTCTGGT 
CTATCAAGTG TTGCTATGAA CAGCGATATT CCAGTGGCGT TTGGTGTGCT GACCACAGAA 
AGTATTGAGC AGGCAATCGA GCGTGCTGGT ACTAAAGCAG GTAATAAAGG TGCAGAAGCT 
GCCCTGACCG CGCTTGAAAT GATTAATGTA ATCAAAGCTA TTAAAGGCTG A
 
Protein sequence
MNVIEGVVAT PNARVAIAIA RFNNFINDSL LDGAIDALKR IGQVSDDNIT VVWVPGAYEL 
PLVANVLAKT NRYDAVIALG TVIRGGTAHF EYVAGEASSG LSSVAMNSDI PVAFGVLTTE 
SIEQAIERAG TKAGNKGAEA ALTALEMINV IKAIKG