Gene YPK_3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3242 
Symbol 
ID6090892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3545813 
End bp3547804 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content49% 
IMG OID641598319 
Productcytochrome o ubiquinol oxidase, subunit I 
Protein accessionYP_001721964 
Protein GI170025459 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02843] cytochrome o ubiquinol oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGGAA AATTAACACT TGATGCGGTT CCATTAGGCG AACCAATCAT AATGGTGACC 
GTTGCCGCAA TTATTATTGG AGGAGCGGCA CTGGTCGCTG CTCTGACTTA TTTCGGCAAG
TGGAAATGGC TGTGGAGCGA ATGGCTGACT TCGGTTGACC ATAAAAAAAT CGGTATCATG
TACATTCTGG TTGCCATGGT CATGCTGTTG CGTGGTTTTG CTGATGCCAT CATGATGCGT
AGTCAGCAAG CGCTTGCTTC TGCGGGCGAA GCGGGTTTCC TACCACCTCA CCACTATGAT
CAGATCTTCA CCGCGCACGG CGTTATCATG ATTTTCTTCA TGGCGATGCC TTTCGTTGTC
GGCTTGATGA ATATAGTTGT ACCGCTACAA ATCGGTGCAC GTGACGTTGC CTTCCCGTTC
CTAAACTCTC TGAGCTTCTG GCTCTTTGCC GTTGGGGTGG TGTTAATTAA CATCTCTCTG
GGAGTCGGTG AATTTGCTCA GACTGGCTGG CTAGCTTACC CACCACTATC CGGTATTGAA
TACAGTCCTG GTGTCGGGGT TGACTACTGG ATATGGAGCC TACAGATCTC CGGTCTGGGG
ACATTGCTAA CGGGTGTGAA CTTCTTTGCG ACTATCCTGA AGATGCGTGC ACCTGGCATG
TCGATGATGA AAATGCCGGT CTTCACTTGG GCGGCATTTT GTACCAACAT CTTGATTATC
GTTTCTTTCC CAATCCTGAC GGTTACCGTC GCATTACTGA CGCTAGATCG TTACCTTGGC
ACCCATTTCT TTACCAATGA TATGGGTGGC AACATGATGA TGTACATCAA CCTGATTTGG
GCCTGGGGCC ATCCGGAAGT GTACATTTTG GTGTTGCCGG TATTCGGGGT CTTCTCCGAA
GTTACCGCAA CCTTCTCAAG AAAGCGCCTG TTTGGTTACA CCTCTCTCGT ATGGGCAACC
ATCGCGATTA CCGTCCTGTC GTTTATTGTT TGGCTACACC ACTTCTTTAC TATGGGGTCC
GGTGCCAACG TTAACGCCTT CTTCGGTATT GCCACGATGA TCATTTCCAT CCCAACAGGG
GTGAAAATTT TCAACTGGTT GTTCACTATG TACCAAGGCC GTATTCAGAT TAACTCCGCA
ATGCTATGGA CTATTGGCTT CATCGTGACC TTCTCTATCG GCGGGATGAC CGGGGTTCTG
CTGGCCGTGC CGGGTGCAAA CTTTGTCCTG CATAACAGCC TGTTCCTGAT TGCGCACTTC
CATAACGTCA TTATCGGTGG TGTAGTATTT GGGTGCTTTG CTGGCCTGAC GTACTGGTGG
CCTAAATCAT TCGGCTTTAT GCTGAATGAG AAATGGGGTA TCCGTGCATT CTGGTTCTGG
ATTATTGGTT TCTTCGTTGC CTTTATGCCG CTGTACGTAT TGGGCTTTAT GGGAATGACC
CGTCGTTTGA GCCAAGACAT CAACCCAGAA TTCCATACGA TGCTCATGGT AGCCGCTGGT
GGTGCAGCAC TGATTGCTTG CGGTATCTTG TGTCAGGTTA TCCAAGTATT CGTCAGTATC
CGTGACCGCG AACAAAACCG CGATCTGACC GGTGACCCAT GGGGTGCCCG TACGCTGGAA
TGGTCGACTT CTTCCCCTCC GCCGTTCTAT AACTTCGCCG TCGTTCCTAA CGTTGTTGAC
CGTGATGAGT TCTGGGACAT GAAAGAGAAA GGCGAGGCCT ATAAGCGCCC AGCGAAATAC
GAAGAAATCC ACATGCCGAA GAATACCGGT GCAGGTGTGA TTATTGCTGG CTTCAGCTTG
ATTTTCGGCT TTGCTATGGT CTGGTATATC TGGTGGCTAG CCATTATTGG CTTCGTTGGC
ATGATCGTTA CCTGGATCGT GAAAAGCTTC GACGAGGATG TAGATTACTA TGTGCCAGCG
GCTGAAGTGG AGCGCATCGA AAATCTTCAT CATGAACAAA TCAGCAAAGC AGGCGTGAAT
CATGTCAACT GA
 
Protein sequence
MLGKLTLDAV PLGEPIIMVT VAAIIIGGAA LVAALTYFGK WKWLWSEWLT SVDHKKIGIM 
YILVAMVMLL RGFADAIMMR SQQALASAGE AGFLPPHHYD QIFTAHGVIM IFFMAMPFVV
GLMNIVVPLQ IGARDVAFPF LNSLSFWLFA VGVVLINISL GVGEFAQTGW LAYPPLSGIE
YSPGVGVDYW IWSLQISGLG TLLTGVNFFA TILKMRAPGM SMMKMPVFTW AAFCTNILII
VSFPILTVTV ALLTLDRYLG THFFTNDMGG NMMMYINLIW AWGHPEVYIL VLPVFGVFSE
VTATFSRKRL FGYTSLVWAT IAITVLSFIV WLHHFFTMGS GANVNAFFGI ATMIISIPTG
VKIFNWLFTM YQGRIQINSA MLWTIGFIVT FSIGGMTGVL LAVPGANFVL HNSLFLIAHF
HNVIIGGVVF GCFAGLTYWW PKSFGFMLNE KWGIRAFWFW IIGFFVAFMP LYVLGFMGMT
RRLSQDINPE FHTMLMVAAG GAALIACGIL CQVIQVFVSI RDREQNRDLT GDPWGARTLE
WSTSSPPPFY NFAVVPNVVD RDEFWDMKEK GEAYKRPAKY EEIHMPKNTG AGVIIAGFSL
IFGFAMVWYI WWLAIIGFVG MIVTWIVKSF DEDVDYYVPA AEVERIENLH HEQISKAGVN
HVN