Gene YPK_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3231 
Symbol 
ID6088995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3533270 
End bp3533542 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content47% 
IMG OID641598308 
Producttranscriptional regulator HU subunit beta 
Protein accessionYP_001721953 
Protein GI170025448 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAGT CACAACTGAT AGACAAAATT GCCGCAGGTG CTGATATTTC TAAAGCGGCC 
GCTGGGCGTG CGTTAGATGC AATTATTACT TCTGTTACTG AATCCTTGAA AGAAGGGGAT
GATGTGGCTC TGGTTGGTTT TGGTACTTTT GCAGTACGTG AGCGTTCTGC ACGTACTGGC
CGTAACCCGC AGACAGGTAA AGAAATTAGT ATTCCAGCCG CTAAAGTACC GGGTTTTCGT
GCCGGTAAAG GCCTGAAAGA CGCAGTAAAC TGA
 
Protein sequence
MNKSQLIDKI AAGADISKAA AGRALDAIIT SVTESLKEGD DVALVGFGTF AVRERSARTG 
RNPQTGKEIS IPAAKVPGFR AGKGLKDAVN