Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3221 |
Symbol | |
ID | 6087545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3520511 |
End bp | 3522334 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598298 |
Product | putative multidrug transporter membraneATP-binding components |
Protein accession | YP_001721943 |
Protein GI | 170025438 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACG CTCAGCAACT TTGGCCGACA TTGAAACGCC TGCTTTCCTA CGGTTCGCCT TATCGTAAAC CGCTGGGGCT GGCAGTCTTA ATGCTGTGGG TTGCGGCAGC AGCAGAGGTA AGTGGTCCAC TACTGATCAG TTATTTTATT GACCATGTAG TCGCCAAAGG CACATTACCT CTGGGGCTAG TCAGTGGGTT GGCATTGGCC TATCTGTTGT TGCAATTATT GGCCGCGACA TTGCACTATT TTCAGGCATT GCTGTTTAAC CGTGCGGCAG TGGGGGTCGT TCAGCGGCTA CGCATTGATG TGATGGACGC TGCATTACGC CAACCTCTCA GTGCTTTTGA TACTCAGCCT GTTGGGCAGT TGATTTCCCG AGTAACCAAT GACACTGAAG TGATCAAAGA TTTATATGTC ATGGTGGTTT CTACGGTTTT GAAAAGTGCG GCCTTAATTA GTGCGATGCT GGTGGCGATG TTTAGTCTGG ATTGGCGGAT GGCGCTGATT TCAATTTGTA TCTTCCCTGC GGTGTTGGTG GTGATGACAA TCTATCAGCG CTATAGCACC CCTATCGTTC GCCGGGTACG ATCCTATCTG GCTGATATTA ACGATGGTTT TAATGAAGTC ATTAATGGCA TGGGCGTCAT TCAGCAATTC CGTCAGCAGG CCCGTTTCGG GGAACGCATG GCGTCTGCCA GCCGTGCGCA TTATGTTGCC CGGATGCAAA CCTTACGGCT GGAGGGCTTT CTATTACGCC CTTTATTGAG CCTATTCTCC GCCTTGGTGT TATGTGGTTT ACTGCTGCTT TTCGGTTTCA GCCCTGAAGG TTCTGTGGGG GTGGGTGTGC TGTATGCGTT CATTAATTAC CTTGGCCGCC TGAATGAGCC GTTGATTGAA CTGACATCGC AGCAATCAAT TATGCAACAG GCCGTGGTGG CAGGAGAGCG TATTTTTGAT CTGATGGATC GTGCGCAGCA GGACTATGGT AGCGACAATA TTCCCTTGAG CAGTGGCCGT ATTCAGGTGG AAAACGTCAG CTTTGCGTAT CGCTCGGATA AAATGGTGTT ACACAATATT TCTCTCAGTG TCCCCTCCCG TGGATTTGTG GCTTTAGTTG GGCACACCGG CAGTGGTAAA AGTACGCTAG CTAACCTGTT GATGGGCTAC TATCCCATTC AGCAAGGTGA GATTTTGCTT GATGGCCGAC CATTATCCCG CCTCTCCCAT CAGGTTCTGC GCCAGGGGGT AGCGTTGGTA CAGCAAGATC CCGTGGTGTT GGCTGACTCC TTCTTTGCGA ATATCACCCT TGGGCGTGAC CTTAGTGAAC AGCAAGTGTG GGAGGCACTC GAAACCGTTC AATTGGCACC GTTGGTTCGT ACCTTACCTG ATGGCTTGTA CAGTTTACTT GGGGAACAGG GCAATACCTT GTCTGTTGGG CAAAAACAGT TGCTGGCGAT GGCGCGGGTG TTGGTGCAAG CGCCCCAAAT CCTGATTCTG GATGAAGCCA CTGCGAATAT TGACTCTGGC ACTGAACAGG CTATTCAGCG GGCATTACAG GTGATTCGAA AAAATACCAC GCTGGTGGTT ATTGCTCATC GCCTTTCGAC GATTGTGGAG GCGGATAGTA TTTTGGTACT GCACCGTGGT GTTGCGGTTG AGCAGGGTAA TCATCAAGCG CTGCTAGCTG CCCGTGGGCG TTATTACCAG ATGTACCAGT TGCAGTTAGT CAGCGAAGAT TTGGCTGCCA TTGATCAGGA AGCTATTGAT AAAGGCTCTA TTGATCAAAG CACTATTGAT CAAGCCGGAA TGAGCGTGAG TTAA
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Protein sequence | MNNAQQLWPT LKRLLSYGSP YRKPLGLAVL MLWVAAAAEV SGPLLISYFI DHVVAKGTLP LGLVSGLALA YLLLQLLAAT LHYFQALLFN RAAVGVVQRL RIDVMDAALR QPLSAFDTQP VGQLISRVTN DTEVIKDLYV MVVSTVLKSA ALISAMLVAM FSLDWRMALI SICIFPAVLV VMTIYQRYST PIVRRVRSYL ADINDGFNEV INGMGVIQQF RQQARFGERM ASASRAHYVA RMQTLRLEGF LLRPLLSLFS ALVLCGLLLL FGFSPEGSVG VGVLYAFINY LGRLNEPLIE LTSQQSIMQQ AVVAGERIFD LMDRAQQDYG SDNIPLSSGR IQVENVSFAY RSDKMVLHNI SLSVPSRGFV ALVGHTGSGK STLANLLMGY YPIQQGEILL DGRPLSRLSH QVLRQGVALV QQDPVVLADS FFANITLGRD LSEQQVWEAL ETVQLAPLVR TLPDGLYSLL GEQGNTLSVG QKQLLAMARV LVQAPQILIL DEATANIDSG TEQAIQRALQ VIRKNTTLVV IAHRLSTIVE ADSILVLHRG VAVEQGNHQA LLAARGRYYQ MYQLQLVSED LAAIDQEAID KGSIDQSTID QAGMSVS
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