Gene YPK_3195 details

Gene Information

• Locus tag: YPK_3195
• ID: 6087244
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 3494311
• End bp: 3496185
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641598272
• Product: heat shock protein 90
• Protein accession: YP_001721917
• Protein GI: 170025412
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0326] Molecular chaperone, HSP90 family

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.228822
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATGA AAGGTCAAGA AACCCGTGGA TTCCAGTCTG AAGTAAAACA GCTCCTCCAT 
TTGATGATTC ACTCGCTTTA TTCCAATAAA GAAATTTTTC TGCGCGAGCT GATCTCCAAT 
GCTTCTGATG CTGCAGATAA ACTCCGTTTC CGTGCCCTGT CTAACCCCGA ACTCTTTGAA 
GGGGATGGCG AACTGAGAGT GCGTTTATCT TTTGATAAAG AGAAACGTAC TTTAACCCTG 
AGTGATAACG GCATCGGTAT GACCCGTGAC GAAGTCATTG ATAATCTTGG TACTATCGCC 
AAATCAGGGA CTAAAGCATT TCTTGAATCA ATCGGTTCTG ATCAGGCCAA AGACAGCCAA 
TTAATCGGTC AATTTGGTGT GGGTTTCTAC TCAGCATTTA TTGTTGCCGA TAAAGTTACC 
GTACGTACCC GAGCTGCCGG TGCCCCTGCC GATACCGGTG TATTCTGGGA ATCTGCTGGT 
GAAGGTGATT ACACCATCGC CGATATAACT AAAGACGAGC GTGGTACTGA AATTACGCTA 
CATTTGCGTG AAGGCGAAGA CGAGTATCTG GATGACTGGC GTCTACGTTC TGTTATCAGC 
AAATACTCAG ATCATATTGC ACTGCCGGTT GAAATTCAGG TTAAAAATGA AGAAGACGGC 
ACTGTCACCT GGGAAAAAAT CAACAAAGCT CAGGCGCTGT GGACCCGTGG TAAAGCAGAA 
ATCTCTGACG ACGAATACAA AGCATTTTAC AAACATATTG CCCATGATTT TACCGATCCA 
CTCAGTTGGA GTCACAACCG CGTTGAAGGG AAGCAGGAAT ACACCAGCTT GCTGTATATC 
CCCGCGCAGG CACCATGGGA TATGTGGAAC CGTGATCACA AACATGGTTT AAAACTTTAT 
GTGCAGCGTG TGTTTATCAT GGATGAAGCT GAGCAGTTTA TGCCGAACTA TCTGCGGTTT 
GTCCGTGGTT TGATAGATTC GAACGATCTG CCGCTGAACG TCTCCCGTGA GATTTTACAA 
GACAGTCGTA TTACACAGAA TCTGCGCAGT GCATTGACTA AGCGTGTGCT GCAAATGCTG 
GAAAAACTGG CTAAAGATGA TGCTGAGAAA TATCAGCAAT TCTGGCAACA ATTCGGCATG 
GCATTAAAAG AAGGCCCAGC GGAAGATGGT AGCAATAAAG AGACTATCGC TAAGCTATTG 
CGCTTTGCTT CAACGCATAC CGACAGTTCC GCACAGACCG TGTCACTGGA AGACTATGTC 
AGCCGTATGG CAGAAGGGCA GGAGAAAATT TATTACATCA CTGCTGACAG CTATGCTGCT 
GCGAAGAGTA GCCCGCATCT GGAACTGTTC CGTAAAAAAG GTATCGAGGT CCTATTGTTA 
TCCGATCGTA TCGACGAATG GATGATGAGC TACCTGACTG AGTTCGAAGG TAAAGCGTTC 
CAATCGGTCA GTAAAGCAGA TGACTCACTG AATAAATTGG CTGATGAAGA AAATCCAGAG 
CAGCAAGAAG CAGAGAAAGC ACTGGAGCCC TTCGTTGAAC GCGTGAAAAC GTTATTGGGT 
GAGCGTGTTA AAGACGTGCG CTTGACACAT CGCCTAACGG ATACACCCGC AATCGTAACG 
ACTGATGCGG ATGAAATGAG TACGCAGATG GCTAAGCTAT TCGCGGCCGC GGGTCAACAG 
GCTCCGGAAG TGAAGTACAT CTTTGAACTG AACCCAGATC ATGGCTTGGT TAAGCGTGCT 
GCGGAAGTTA CAGATGACAC TCAATTTGCA CAATGGGTTG AGTTATTACT GGATCAGGCG 
CTGCTCGCGG AGAGGGGAAC ATTGGAAGAC CCTAACCAGT TTATTCGTCG AATGAATCAG 
TTACTCACGG CTTAA 

 

Protein sequence

MNMKGQETRG FQSEVKQLLH LMIHSLYSNK EIFLRELISN ASDAADKLRF RALSNPELFE 
GDGELRVRLS FDKEKRTLTL SDNGIGMTRD EVIDNLGTIA KSGTKAFLES IGSDQAKDSQ 
LIGQFGVGFY SAFIVADKVT VRTRAAGAPA DTGVFWESAG EGDYTIADIT KDERGTEITL 
HLREGEDEYL DDWRLRSVIS KYSDHIALPV EIQVKNEEDG TVTWEKINKA QALWTRGKAE 
ISDDEYKAFY KHIAHDFTDP LSWSHNRVEG KQEYTSLLYI PAQAPWDMWN RDHKHGLKLY 
VQRVFIMDEA EQFMPNYLRF VRGLIDSNDL PLNVSREILQ DSRITQNLRS ALTKRVLQML 
EKLAKDDAEK YQQFWQQFGM ALKEGPAEDG SNKETIAKLL RFASTHTDSS AQTVSLEDYV 
SRMAEGQEKI YYITADSYAA AKSSPHLELF RKKGIEVLLL SDRIDEWMMS YLTEFEGKAF 
QSVSKADDSL NKLADEENPE QQEAEKALEP FVERVKTLLG ERVKDVRLTH RLTDTPAIVT 
TDADEMSTQM AKLFAAAGQQ APEVKYIFEL NPDHGLVKRA AEVTDDTQFA QWVELLLDQA 
LLAERGTLED PNQFIRRMNQ LLTA