| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3191 |
|---|
| Symbol | |
|---|
| ID | 6087225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3489990 |
|---|
| End bp | 3490763 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641598268 |
|---|
| Product | glucose-1-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_001721913 |
|---|
| Protein GI | 170025408 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.216457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCAG TCATTTTGGC CGGAGGCCTT GGAACCCGTC TTAGTGAAGA GACCGTAGTA
AAACCAAAAC CAATGGTAGA GATTGGTGGG AAGCCTATTC TCTGGCATAT TATGAAACTT
TACTCTTCTT ATGGCATCAA TGATTTCGTT ATTTGCTGTG GTTATAAAGG CTATGTCATT
AAAGAATATT TTGCGAATTA CTTTATGCAC ATGTCGGATA TTACCTTCTG CATGCGTGAT
AATGAAATGA TAGTACACCA AAAGCGAGTC GAACCCTGGA ATGTCACGTT AGTAGACACC
GGCGAAGATT CTATGACCGG TGGCCGACTG AGGCGTGTAA AAGATTACGT CAAAGACGAT
GAGGCTTTCT GTTTCACCTA TGGTGATGGT GTGAGTGACG TCAATATTGC TGAATTAATT
GAATTCCATA AGAGCCACGG CAAGCAAGCC ACATTAACGG CAACCTATCC CCCAGGCCGT
TTTGGTGCGC TGGATATTAA AGATAAACAA GTACGTAGTT TTAAAGAAAA ACCAAAAGGC
GATGGCGCAT TGATCAACGG CGGTTATTTT GTTTTGTCGC CTAAAGTTAT CGATCTGATC
GATGGTGATA AGTCTACTTG GGAGCAGGAA CCTTTAATGA CATTAGCTGC GCAGGGGGAG
TTGATGGCGT TTGAACATGC CGGGTTCTGG CAGCCAATGG ATACGTTGCG TGACAAGATC
TATCTGCATG AACTATGGGA AGAAGGCAGG GCACCTTGGA AGGTATGGGA ATAA
|
|---|
| Protein sequence | MKAVILAGGL GTRLSEETVV KPKPMVEIGG KPILWHIMKL YSSYGINDFV ICCGYKGYVI
KEYFANYFMH MSDITFCMRD NEMIVHQKRV EPWNVTLVDT GEDSMTGGRL RRVKDYVKDD
EAFCFTYGDG VSDVNIAELI EFHKSHGKQA TLTATYPPGR FGALDIKDKQ VRSFKEKPKG
DGALINGGYF VLSPKVIDLI DGDKSTWEQE PLMTLAAQGE LMAFEHAGFW QPMDTLRDKI
YLHELWEEGR APWKVWE
|
|---|
| |